Published January 17, 2022
| Version 0.0.1
Dataset
Open
SWAM model from GTEx dataset
Description
The SWAM models for each GTEx tissue v6 and v8 are publicly available at https://doi.org/10.5281/zenodo.5866500 . These models are trained from GTEx PrediXcan models across all tissues, targeting each tissue type, and formatted in a format that can be directly used by the PrediXcan software tool. See https://github.com/aeyliu/SWAM and https://github.com/aeyliu/SWAM-manuscript for the detailed code to reproduce these resources. More comprehensive information will be available when this resource is linked with a peer-reviewed publication.
Files
swam_gtex_v8.md5sum.txt
Additional details
References
- Liu A, Kang HM. Meta-imputation of transcriptome from genotypes across multiple datasets using summary-level data. bioRxiv. 2021 Jan 1.