Published September 7, 2021
| Version v3
Dataset
Open
Comparative genomics of eight aphid subfamilies reveals variable relationships between host horizontally-transferred genes and symbiont peptidoglycan metabolism.
Creators
- 1. Department of Integrative Biology, University of Texas at Austin
Description
Genome assemblies, annotations, and orthologs of aphids (Geopemphigus sp., Stegophylla sp., Chaitophorus viminalis, and Pemphigus obesinymphae) and their symbionts.
step1_final_assemblies_and_annotations.tar.gz: Aphid genomes and annotations
step2_protein_evidence_used_for_genome_annotation.tar.gz: Protein evidence used for aphid genome annotation
step3_amino_acid_inputs_for_aphid_orthologs: amino acid inputs for aphid ortholog assignmentt
step5_buchnera_genomes_and_annotations.tar.gz: Buchnera genomes and annotations
Files
All_instances_of_Genes_in_Escherichia_coli_K-12_substr._MG1655.txt
Files
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Additional details
Funding
- National Institutes of Health
- Investigations of the role of host controlled peptidoglycan recycling in the regulation of the pea aphid-Buchnera symbiosis 5F32GM126706-02