Published December 2, 2021 | Version 1.0
Software Open

evotools/CattleGraphGenomePaper: Code for Talenti et al. A cattle graph genome incorporating global breed diversity.

  • 1. The Roslin Institute, Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush Campus, Midlothian, EH25 9RG, United Kingdom
  • 2. Centre for Tropical Livestock Genetics and Health, ILRI Kenya, Nairobi, 30709-00100, Kenya
  • 3. The International Livestock Research Institute, PO Box 30709, Nairobi, Kenya.
  • 4. Department of Veterinary Pathology and Microbiology, University of Nigeria, Nsukka. Enugu State, Nigeria
  • 5. Biotechnology Division, National Veterinary Research Institute, Vom, Plateau State, Nigeria.
  • 6. International Livestock Research Institute (ILRI) PO 5689, Addis Ababa, Ethiopia
  • 7. Ribeirão Preto College of Nursing, University of Sao Paulo, Ribeirão Preto, SP, Brazil
  • 8. Faculty of Veterinary and Animal Sciences, Gomal University, Dera Ismail Khan, Pakistan

Description

This release contains the code used for the analyses in Talenti el al. A cattle graph genome incorporating global breed diversity.

Files

evotools/CattleGraphGenomePaper-1.0.zip

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Additional details

Funding

UK Research and Innovation
Prediction of genes and regulatory elements in farm animal genomes BBS/E/D/10002070
UK Research and Innovation
GCRF-BBR: Beyond the genome: Enabling tropical livestock EWAS of infectious diseases BB/P024025/1
UK Research and Innovation
GCRF-BBR: A compendium of structural variation across African cattle breeds BB/R015155/1
UK Research and Innovation
Beyond a single reference: Building high quality graph genomes capturing global diversity BB/T019468/1