Published November 1, 2021
| Version 1.0
Dataset
Open
Alignment files for coverage benchmarks: Illumina and Nanopore sequencing datasets
Description
- cpara-illumina-noseq.bam and cpara-ont-noseq.bam: BAM files produced aligning the raw reads produced respectively by Illumina NextSeq and ONT Nanopore sequencing of an isolate of C. parapsilosis to evaluate the coverage calculations using real datasets.*
- HG00258.bam: Exome sequencing from the 1000 Genomes Project (Clarke et al 2016 https://doi.org/10.1093/nar/gkw829).
- panel_01.bam: targeted sequencing of a Human gene panel of 16 genes.*
* Sequences and qualities have been removed
Files
Files
(12.5 GB)
Name | Size | Download all |
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md5:830b5d827005979df63a490a17617e3b
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257.6 MB | Download |
md5:a6660d1a9fbf0ceddc91b0de62a5c88c
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20.7 MB | Download |
md5:a2403411d975d36c49c4f5c24a5b75ea
|
12.2 GB | Download |
md5:670bbb5f2e96965e8b1d05a8cef3bb04
|
10.9 MB | Download |
Additional details
Funding
- Quadram Institute Bioscience UKRI Innovation Fellowships: BBSRC Flexible Talent Mobility Accounts BB/R506552/1
- UK Research and Innovation
- CLIMB-BIG-DATA: A Cloud Infrastructure for Big-Data Microbial Bioinformatics MR/T030062/1
- UK Research and Innovation