Published October 22, 2021
| Version v1
Dataset
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RNA dataset to train XGBoost model
Description
This repository includes the RNA-seq dataset from 27 GBM samples, as published in this manuscript:
Topographic mapping of the glioblastoma proteome reveals a triple axis model of intra-tumoral heterogeneity
Lam KHB, Leon AJ, Hui W, Lee SCE, Batruch I, Faust K, Koritzinsky M, Richer M, Djuric U, Diamandis P (under review)
Notes
Sample ID HISTOLOGICAL_DIAGNOSIS IDH1_STATUS-sequencing GENDER AGE OS_STATUS OS_MONTHS
GBM_1012 GBM WT female 80 Dead 11
GBM_1017 GBM MUT male 45 Alive 54
GBM_1029 GBM MUT female 53 Alive 56
GBM_1044 GBM MUT male 47 Alive 52
GBM_1064 GBM WT female 62 Alive 49
GBM_1065 GBM WT male 48 Dead 5
GBM_1083 GBM WT male 60 Dead 4
GBM_1143 GBM WT female 61 Dead 10
GBM_1164 GBM WT male 66 Dead 11
GBM_1173 GBM WT male 74 Dead 5
GBM_1182 GBM WT male 54 Dead 9
GBM_1202 GBM WT male 54 Dead 7
GBM_1239 GBM WT female 62 Dead 6
GBM_1243 GBM WT female 67 Dead 4
GBM_1274 GBM WT male 75 Dead 7
GBM_1305 GBM WT male 74 Dead 9
GBM_351 GBM WT female 66 Dead 67
GBM_590 GBM WT female 64 Dead 44
GBM_753 GBM WT female 54 Dead 55
GBM_765 GBM WT female 51 Dead 60
GBM_778 GBM WT male 43 Dead 34
GBM_804 GBM WT female 72 Dead 5
GBM_810 GBM WT male 71 Dead 4
GBM_859 GBM WT female 63 Dead 33
GBM_866 GBM WT female 62 Dead 12
GBM_881 GBM WT male 60 Dead 11
GBM_893 GBM MUT female 30 Dead 40
GBM_931 GBM WT male 56 Dead 6
GBM_935 GBM WT female 71 Dead 6
GBM_943 GBM WT male 63 Alive 69
GBM_945 GBM WT female 63 Dead 12
GBM_986 GBM WT female 57 Alive 63
GBM_989 GBM WT male 56 Dead 8
Files
GLORY_20170922.genes_all_samples_TPM.txt
Files
(7.1 MB)
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