Published April 20, 2023
| Version v1.2.5
Software
Open
pymCADRE: Tissue-specific model reconstruction
Creators
- 1. Eberhard Karls University of Tübingen, Institute for Bioinformatics and Medical Informatics, Tübingen
Description
pymCADRE is an advanced re-implementation of the metabolic Context-specificity Assessed by Deterministic Reaction Evaluation (mCADRE) algorithm in Python. It constructs tissue-specific metabolic models by leveraging gene expression data and literature-based evidence, along with network topology information.
Files
draeger-lab/pymCADRE-v1.2.5.zip
Files
(1.2 MB)
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md5:0ebc84e74d97c90e2bedd8fe828e3779
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Additional details
Related works
- Is supplement to
- https://github.com/draeger-lab/pymCADRE/tree/v1.2.5 (URL)