Published October 13, 2021
| Version v1.2.0
Software
Open
pymCADRE: Tissue-specific model reconstruction
Creators
- 1. Eberhard Karls University of Tübingen, Institute for Bioinformatics and Medical Informatics, Tübingen
Description
pymCADRE is an advanced re-implementation of the metabolic Context-specificity Assessed by Deterministic Reaction Evaluation (mCADRE) algorithm in Python. It constructs tissue-specific metabolic models by leveraging gene expression data and literature-based evidence, along with network topology information.
Files
draeger-lab/pymCADRE-v1.2.0.zip
Files
(1.9 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:d0a18d996c08acc1ff488408e60f1d6a
|
1.9 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/draeger-lab/pymCADRE/tree/v1.2.0 (URL)