Published May 25, 2018
| Version v0.3.3
Software
Open
CGATOxford/cgat: Bugfixing release
Creators
- 1. MRC
- 2. CGAT
- 3. University of Sheffield
- 4. Kennedy Institute of Rheumatology, University of Oxford
- 5. University of Oxford
- 6. Imperial College London
Description
- Fix GO.py for dumping ensembl annotations for versions > 88 ; https://github.com/CGATOxford/cgat/pull/384 ; https://github.com/CGATOxford/cgat/pull/385 ; https://github.com/CGATOxford/cgat/pull/386
- make sure we stick to conda 4.3 until a workaround is found for conda 4.4 ; https://github.com/CGATOxford/cgat/pull/387
- bed2bed.py: new method rename-chr ; https://github.com/CGATOxford/cgat/pull/389
- gff2gff.py: new method rename-chr ; https://github.com/CGATOxford/cgat/pull/390
- put test_import.py and test_style.py back ; https://github.com/CGATOxford/cgat/pull/391
- update conda from 4.3 to 4.5 (solving "CXXABI_1.3.9' not found" error ; https://github.com/ContinuumIO/anaconda-issues/issues/5191) ; https://github.com/CGATOxford/cgat/compare/beffc47c091b6...abfe82bcec1c7
- added test for C/C++ compiler ; https://github.com/CGATOxford/cgat/pull/394
Files
CGATOxford/cgat-v0.3.3.zip
Files
(205.6 MB)
| Name | Size | Download all |
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md5:f1a84d3c207edf34623130f935734718
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Additional details
Related works
- Is supplement to
- https://github.com/CGATOxford/cgat/tree/v0.3.3 (URL)