LayNii: A software suite for layer-fMRI
Description
LN2_GEODISTANCES to measure geodesic distances in a set of voxels from another set of voxels.
LN2_IFPOINTS is a simplified (and more general) version of the iterative farthest points algorithm used in LN2_COLUMNS.
LN2_MASK is intended to help with voxel section for layer-profile extraction.
LN2_BORDERIZE is introduced to find borders in an integer nifti (e.g. segmentation files, rim files).
LN2_MULTILATERATE algorithm is significantly improved through using pin axis geodesic distances rather than point based geodesic distances.
LN2_LAYERS now have a very minimal masked smoothing applied to the equivolume and equidistance metrics. This is done to mitigate the discrete sampling effects present close to the borders.
LN2_PATCH_FLATTEN minor improvements.
Notes
Files
layerfMRI/LAYNII-v2.1.1.zip
Files
(80.3 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/layerfMRI/LAYNII/tree/v2.1.1 (URL)