Published September 13, 2021
| Version 2.7.0
Software
Open
ellisztamas/faps: Human-readable summary of paternity of individual progeny
Description
Added function to return human readable results about the top candidate fathers for each individual offspring in the data set. This essentially a summary function for sibshipCluster.posterior_paternity_matrix().
- Added method
paternity
to sibshipCluster objects to return a table for that halfsib array only giving the IDs of the mother, offspring, and the N candidate fathers with the highest posterior paternity, along with those probabilities. - To do this I needed to update sibshipCluster to inherit offspring names from paternityArray objects.
- Renamed sibshipCluster.prob_paternity to the more intuitive
posterior_paternity_matrix
Files
ellisztamas/faps-2.7.0.zip
Files
(8.2 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/ellisztamas/faps/tree/2.7.0 (URL)