Published December 31, 2017
| Version v1
Journal article
Restricted
A new species of habitat – forming Suberites (Porifera, Demospongiae, Suberitida) in the Benguela upwelling region (South Africa)
Description
Samaai, Toufiek, Maduray, Seshnee, Janson, Liesl, Ngwakum, Benedicta (2017): A new species of habitat – forming Suberites (Porifera, Demospongiae, Suberitida) in the Benguela upwelling region (South Africa). Zootaxa 4254 (1): 49-81, DOI: 10.11646/zootaxa.4254.1.3
Files
Linked records
Additional details
Identifiers
- URL
- https://www.checklistbank.org/dataset/33249
- LSID
- urn:lsid:zoobank.org:pub:7D9A6F19-FE5D-4A7B-87D0-2EF9964AA969
- LSID
- urn:lsid:plazi.org:pub:FFEDEE1CE740FFC6FF97A02311720F30
- URL
- http://publication.plazi.org/id/FFEDEE1CE740FFC6FF97A02311720F30
References
- Ackers, R.G., Moss, D. & Picton. B.E. (1992) Sponges of the British Isles ("Sponges F"): A colour guide and working document. Marine Conservation Society, Ross on Wye, 175 pp.
- Altschul, S.F., Gish, W., Miller, W., Myers, E.W. & Lipman, D.J. (1990) Basic local alignment search tool. Journal of Molecular Biology, 215, 403-410.
- https://doi.org/10.1016/S0022-2836(05)80360-2
- Atkinson, L.J., Leslie, R.W., Field, J.G. & Jarre, A. (2011) Changes in demersal fish assemblages on the west coast of South Africa, 1986-2009. African Journal of Marine Science, 33, 157-170.
- Benson, D.A., Karsch-Mizrachi, I., Lipman, D.J., Ostell, J. & Sayers, E.W. (2009) GenBank. Nucleic Acids Research, 37 (Database Issue), 26-31. [D26-31]
- Boury-Esnault, N. & Rutzler, K. (Eds.) (1997) Thesaurus of Sponge Morphology. Smithsonian. Contributions to Zoology, 596, 1-55.
- Burton, M. (1930a) Norwegian Sponges from the Norman Collection. Proceedings of the Zoological Society of London, 1930 (2), 487-546, pls. I-II.
- Burton, M. (1930b) Additions to the sponge fauna of the Gulf of Manaar. Annals and Magazine of Natural History, Series 10, 5 (30), 665-676.
- Burton, M. (1931a) On a Collection of Marine Sponges mostly from the Natal Coast. Annals of the Natal Museum, 6 (3), 337- 358, pl. XXIII.
- Burton, M. (1926) Description of South African sponges collected in the South African Marine Survey. Part I. Myxospongia and Astrotetraxonida. Fisheries Bulletin. Fisheries and marine biological survey division, Union of South Africa Report, 4, (Special Report 9), 1-29, pls 6.
- Burton, M. (1929) Porifera. Part II. Antarctic sponges. British Antarctic ('Terra Nova') Expedition, 1910. Natural History Report, London, British Museum (Natural History), Zoology, 6 (4), 393-458, pls. I-V.
- Burton, M. (1933a) Four new marine sponges from Natal. Annals of the Natal Museum, 7 (2), 249.
- Burton, M. (1933b) Report on a small collection of sponges from Stil Bay, South Africa. Annals and Magazine of Natural History, Series 10, 11, 235-244.
- Burton, M. (1936) Notes on sponges from South Africa, with descriptions of new species. Annals and Magazine of Natural History, Series 10, 17 (97), 141-147.
- Cardenas, P., Xavier, J.R., Reveillaud, J., Schander, C. & Rapp, H.T. (2011) Molecular phylogeny of the Astrophorida (Porifera, Demospongiae) reveals an unexpected high level of spicule homoplasy. Plos One, 6 (4), e18318. https://doi.org/10.1371/journal.pone.0018318
- Cardenas,P., Perez,T. & Boury-Esnault, N. (2012). Sponge systematics facing new challenges. Advances in marine biology, 61, 79-209.
- Cardenas, P. & Tore Rapp, H. (2013) Disrupted spiculogenesis in deep-water Geodiidae (Porifera, Demospongiae) growing in shallow waters. Invertebrate Biology, 132 (3), 173-194.
- Chombard, C. & Boury-Esnault, N. (1999) Good congruence between morphology and molecular phylogeny of Hadromerida, or how to bother sponge taxonomists. Memoirs of the Queensland Museum, 44, 100.
- Doyle, J.J. & Doyle J.L. (1987) A rapid DNA isolation procedure for small quatities of fresh leaf tissue. Phytochemical Bulletin, 19, 11-15.
- Doyle, J.J & Doyle, J.L. (1990) Isolation of plant DNA from fresh tissue. Focus,12, 13-15.
- Esper, E.J.C. (1806) Fortsetzungen der Pflanzenthiere in Abbildungen nach der Natur mit Farben erleuchtet nebst Beschreibungen. Zweyter Theil. Raspe, Nurnberg, pp. 25-48, pls. LXV-LXX.
- Fairweather, T. & Leslie, R.W. (2008) Merluccius capensis and M. paradoxus length at 50% maturity based on research survey biological data. Unpublished report, Marine and Coastal Management, South Africa, MCM/2008/JUL/SWG-DEM/42, 5 pp.
- Felsenstein, J. (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39, 783-791. https://doi.org/10.2307/2408678
- Folmer, O., Black, M., Hoeh, W., Lutz, R. & Vrijenhoek, R. (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology, 3, 294-299.
- Fromont, J. & Bergquist, P.R. (1990) Structural characters and their use in sponge taxonomy: when is a sigma not a sigma? In: Rutzler, K. (Ed.), New perspectives in sponge biology. Proceedings 3rd International Sponge Conference. Wood Hole, Smithsonian Institution Press, Washington, pp. 273-278.
- Grant, R.E. (1836) Animal Kingdom. In: Todd, R.B. (Ed.), The Cyclopaedia of Anatomy and Physiology. Fol. 1. Sherwood, Gilbert & Piper, London, pp. 107-118, 1-813.
- Gray, J.E. (1867) Notes on the arrangement of sponges, with the descriptions of some new Genera. Proceedings of the Zoological Society of London, 1867 (2), 492-558, pls. XXVII-XXVIII.
- Hajdu, E., Desqueyroux-Faundez, R., Carvalho, M.D.S., Lobo-Hajdu, G. & Willenz, P. (2013) Twelve new Demospongiae (Porifera) from Chilean fjords, with remarks upon sponge-derived biogeographic compartments in the SE Pacific. Zootaxa, 3744 (1), 1-64.
- Hartman, W.D. (1958) Natural History of the Marine Sponges of Southern New England. Bulletin of the Peabody Museum of Natural History, 12, 1-155.
- Hiscock, K., Stone, S.M.K. & George, J.D. (1983) The marine fauna of Lundy. Porifera (sponges). Report Lundy Field Society, 34, 16-35.
- Hutchings, L., Augustyn, C.J., Cockcroft, A., van der Lingen, C., Coetzee, J., Leslie, R.W., Tarr, R.J., Oosthuizen, H., Lipinski, M.R., Roberts, M.R., Wilke, C., Crawford, R., Shannon, L.J. & Mayekiso, M. (2009) Marine fisheries monitoring programmes in South Africa. South African Journal of Science, 105, 182-192.
- Johnston, G. (1842) A History of British Sponges and Lithophytes. W.H. Lizars, Edinburgh, i-xii, 1-264, pls. I-XXV.
- Kapli, P., Lutteropp, S., Zhang, J., Kobert, K., Pavlidis, P., Stamatakis, A. & Flouri, T. (2016) Multi-rate Poisson Tree Processes for single-locus species delimitation under Maximum Likelihood and Markov Chain Monte Carlo. bioRxiv, 2016, 0 63875.
- Keller, C. (1891) Die Spongienfauna des Rothen Meeres (II. Halfte). Zeitschrift fur wissenschaftliche Zoologie, 52, 294-368, pls. XVI-XX, pp. 316-317.
- Kimura, M. (1980) A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16, 111-120.
- Kirkpatrick, R. (1902) Descriptions of South African Sponges. Part I. Marine Investigations in South Africa, 1, 219-232, pls. I- III.
- Kirkpatrick, R. (1903a) Descriptions of South African Sponges. Part II. Marine Investigations in South Africa, 2 (14), 171-180, pl. IV.
- Kirkpatrick, R. (1903b) Descriptions of South African Sponges. Part III. Marine Investigations in South Africa, 2 (14), 233- 264, pls. V-VI.
- Lendenfeld, R. Von (1888) Descriptive Catalogue of the Sponges in the Australian Museum, Sidney. Taylor & Francis, London, I-xiv, 1-260, pls 1-12.
- Lendenfeld, R. von (1898) Die Clavulina der Adria. Nova acta Academiae Caesareae Leopoldino Carolinae germanicae naturaecuriosorum, 69, 1-251, pls. I-XII. page(s), 144.
- Levi, C. (1958) Resultats scientifiques des Campagnes de la 'Calypso'.Campagne 1951-1952 en Mer Rouge (suite). 11. Spongiaires de Mer Rouge recueillis par la 'Calypso' (1951-1952). Annales de l'Institut oceanographique, 34 (3), 3-46.
- Levi, C. (1959) Resultats scientifiques des Campagnes de la 'Calypso'. Campagne de la 'Calypso' dans le Golfe de Guinee et aux iles Principe, Sao Tome et Annobon. 5. Spongiaires. Annales de l'Institut oceanographique, 37 (4), 115-141, pls. 5-6, 125, fig.14, pl. 5, fig. 4.
- Levi, C. (1964) Spongiaires des zones bathyale, abyssale et hadale. Galathea Report. Scientific Results of The Danish Deep- Sea Expedition Round the World, 1950-52, 7, 63-112, pls. II-XI.
- Linnaeus, C. (1767) Systema naturae sive regna tria naturae, secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis. Fol. 1. Part 2. 12th Edition. Laurentii Salvii, Holmiae, 795 pp. [pp. 533-1327]
- Lin, X., Stur, E. & Ekrem, T. (2015). Exploring genetic divergence in a species-rich insect genus using 2790 DNA Barcodes. Plos One, 10 (9), e0138993.
- Maduray, S. (2014) Studies on the diversity and spatial distribution of deep water sponges along the west and south coasts of South Africa. MSc Thesis (unpublished), University of the Western Cape, Cape Town, pp. 117.
- Maldonado, M., Carmona, M.C., Uriz, M.J. & Cruzado, A. (1999) Decline in Mesozoic reef-building sponges explained by silicon limitation. Nature, 401, 785-788.
- Manuel, M., Borchiellini, C., Alivon, E., Le Parco, Y., Vacelet, J. & Boury-Esnault, N. (2003) Phylogeny and evolution of calcareous sponges: monophyly of calcinea and calcaronea, high level of morphological homoplasy, and the primitive nature of axial symmetry. Systematic Biology, 52, 311-333.
- Mead, A., Carlton, J.T., Griffiths, C.L. & Rius, M. (2011) Introduced and cryptogenic marine and estuarine species in South Africa. Journal of Natural History, 45, 2463-2524.
- Nardo, G.D. (1833) Auszug aus einem neuen System der Spongiarien,wonach bereits die Aufstellung in der Universitats- Sammlung zu Padua gemacht ist. In: Isis. Oder Encyclopadische Zeitung Coll. Oken, Jena, pp. 519-523.
- Olivi, G. (1792) Alcyonium and Spongia. Zoologia Adriatica, 1792, 235-254 & 262-273.
- Pitcher, G.C., Brown, P.C. & Mitchell-Innes, B.A. (1992) Spatio-temporal variability of phytoplankton in the southern Benguela upwelling system. South African Journal of Marine Science, 12, 439-456. https://doi.org/10.2989/02577619209504717
- Redmond, N.E., Morrow, C.C., Thacker, R.W., Diaz, M.C., Boury-Esnault, N., Cardenas, P., Hajdu, E., Lobo-Hajdu, G., Picton, B.E., Pomponi, S.A. & Kayal, E. (2013) Phylogeny and systematics of Demospongiae in light of new small-subunit ribosomal DNA (18S) sequences. Integrative and Comparative Biology, 53, 388-415. https://doi.org/10.1093/icb/ict078
- Ridley, S.O. & Dendy, A. (1886) Preliminary Report on the Monaxonida collected by H.M.S. 'Challenger'. Annals and Magazine of Natural History, Series 5, 18, 325-351, 470-493.
- Ridley, S.O. & Dendy, A. (1887) Report on the Monaxonida collected by H.M.S. 'Challenger' during the years 1873-1876. Report on the Scientific Results of the Voyage of H.M.S. 'Challenger', 1873-1876. Zoology, 20 (59), i-lxviii, 1-275, pls. I-LI, 1 map.
- Saitou, N. & Nei, M. (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4, 406-425.
- Samaai, T. & Gibbons, M.J. (2005) Demospongiae taxonomy and biodiversity of the Benguela region on the west coast of South Africa. African Natural History, 1, 1-96.
- Schonberg, C.H.L. & Barthel, D. (1998) Unreliability of Demosponge skeletal characters: the example of Halichondria panicea. In: Watanabe, Y. & Fusetani, N. (Eds.), Sponge Sciences. Multidisciplinary Perspectives. Springer, Tokyo, pp. 41-53.
- Schmidt, O. (1870) Grundzuge einer Spongien-Fauna des atlantischen Gebietes. Wilhelm Engelmann, Leipzig, ii + 88 pp., VI pls. [pp. iii-iv, 1-88, pls. I-VI]
- Shearer, T.L., van Oppen, M.J.H., Romano, S.L. & Worheide, G. (2002) Slow mitochondrial DNA sequence evolution in the Anthozoa (Cnidaria). Molecular Ecology, 11 (12), 2475-2487.
- https://doi.org/10.1046/j.1365-294X.2002.01652.x
- Sole-Cava, A.M. & Thorpe, J.P. (1986) Genetic differentiation between morphotypes of the marine sponge Suberites ficus (Demospongiae: Hadromerida). Marine Biology, 93, 247-253.
- Sink, K.J., Attwood, C.G., Lombard, A.T., Grantham, H., Leslie, R., Samaai, T., Kerwath, S., Majiedt, P., Fairweather, T., Hutchings, L., van der Lingen, C., Atkinson, L.J., Wilkinson, S., Holness, S. & Wolf, T. (2011) Spatial planning to identify focus areas for offshore biodiversity protection in South Africa. Final Report for the Offshore Marine Protected Area Project. South African National Biodiversity Institute, Cape Town, pp. 66.
- Sink, K., Holness, S., Harris, L., Majiedt, P., Atkinson, L., Robinson, T., Kirkman, S., Hutchings, L., Leslie, R., Lamberth, S., Kerwath, S., von der Heyden, S., Lombard, A., Attwood, C., Branch, G., Fairweather, T., Taljaard, S., Weerts, S., Cowley, P., Awad, A., Halpern, B., Grantham, H. & Wolf, T. (2012) National Biodiversity Assessment 2011. Technical Report. Fol. 4. Marine and Coastal Component. South African National Biodiversity Institute, Pretoria, pp. 325.
- Soest, R.W.M. van (2002) Family Suberitidae. In: Hooper, J.N.A & van Soest, R.W.M. (Eds.), Systema Porifera, a guide to the classification of the sponges. Kluwer Academic/Plenum Publishers, New York, pp. 227-244.
- Soest, R.W.M. van, Boury-Esnault, N., Hooper, J.N.A., Rutzler, K., de Voogd, N.J., Alvarez de Glasby, B., Hajdu, E., Pisera, A.B., Manconi, R., Schoenberg, C., Klautau, M., Picton, B., Kelly, M., Vacelet, J., Dohrmann, M., Diaz, M.C., Cardenas, P. & Carballo, J. L. (2016) World Porifera database. Available from: http://www.marinespecies.org/porifera/ porifera.php?p=taxdetails&id=170877 (accessed 11 October 2016)
- Sollas, W.J. (1885) A Classification of the Sponges. Annals and Magazine of Natural History, Series 5, 16 (95), 395. https://doi.org/10.1080/00222938509459901
- Stephens, J. (1915) Atlantic Sponges collected by the Scottish National Antarctic Expedition. Transactions of the Royal Society of Edinburgh, 50 (2), 423-467, pls. XXXVIII-XL.
- Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. (2013) MEGA6: Molecular Evolutionary Genetics Analysis version 6. Molecular Biology and Evolution, 30, 2725-2729.
- Teske, P.R., Bader, S. & Golla, T.R. (2015) Passive dispersal against an ocean current. Marine Ecology Progress Series, 539, 153-163.
- Thiele, J. (1905) Die Kiesel-und Hornschwamme der Sammlung Plate. Zoologische Jahrbucher Supplement 6 (Fauna Chilensis III), 407-496, pls. 27-33.
- Topsent, E. (1904) Spongiaires des Acores. Resultats des campagnes scientifiques accomplies par le Prince Albert I, Monaco, 25, 1-280, pls. 1-18, pp. 124.
- Uriz, M.J. (1984b) Descripcion de nuevas esponjas del litoral de Namibia (sudoeste de Africa). Resultados Expediciones Cientificas, 12, 107-116.
- Uriz, M.J. (1987) Sponges from the South-West of Africa: description of species. In: Jones, W.C. (Ed.), European Contributions to the Taxonomy of Sponges. Sherkin Island Marine Station, Sherkin Island, County Cork, pp. 54-73, pp. 1- 140.
- Uriz, M.J. (1988) Deep-water sponges from the continental shelf and slope off Namibia (Southwest Africa): Classses Hexactinellida and Demospongia. Monografias de Zoologia Marina, 3, 9-157.
- Uriz, M.J. (1990) Possible influence of trawl fishery on recent expansion in the range of Suberites tylobtusa in the Southeast Atlantic. In: Rutzler, K. (Ed.), New perspective in Sponge Biology. Smithsonian Institute Press, Washington D.C., 309- 315.
- Worheide, G. (2006) Low variation in partial cytochrome oxidase subunit I (COI) mitochondrial sequences in the coralline demosponge Astrosclera willeyana across the Indo-Pacific. Marine Biology, 148 (5), 907-912. https://doi.org/10.1007/s00227-005-0134-y
- Worheide, G., Hooper, J.N.A. & Degnan, B.M. (2002) Phylogeography of western Pacific Leucetta 'chagosensis ' (Porifera: Calcarea) from ribosomal DNA sequences: implications for population history and conservation of the Great Barrier Reef World Heritage Area (Australia). Molecular Ecology, 11, 1753-1768.
- https://doi.org/10.1046/j.1365-294X.2002.01570.x
- Zea, S. (1987) Esponjas del Caribe Colombiano. Catalogo Cientifico, Bogota, 286 pp.