Published March 31, 2008 | Version v1
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Phylogeography of the Neotropical catfish Pimelodus albicans (Siluriformes: Pimelodidae) from río de la Plata basin, South America, and conservation remarks

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Vergara, Julia, Azpelicueta, María de las Mercedes, Garcia, Graciela (2008): Phylogeography of the Neotropical catfish Pimelodus albicans (Siluriformes: Pimelodidae) from río de la Plata basin, South America, and conservation remarks. Neotropical Ichthyology 6 (1): 75, DOI: 10.1590/S1679-62252008000100009, URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252008000100009&lng=en&tlng=en

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  • Literature Cited de Almeida, F. S., L. M. K. Sorde & E. P. B. Contel. 2003. Population structure analysis of Pimelodus maculatus (Pisces, Siluriformes) from the Tiete and Paranapanema Rivers (Brazil). Genetics and Molecular Biology, 26(3): 301-305.
  • Batista J. S. & J. A. Alves-Gomes. 2006. Phylogeography of Brachyplatystoma rousseauxii (Siluriformes - Pimelodidae) in the Amazon Basin offers preliminary evidence for the first case of "homing" for an Amazonian migratory catfish. Genetics and Molecular Research, 5(4): 723-740.
  • Bockman, F. A. & G. M. Guazelli. 2003. Family Heptapteridae (Heptapterids). Pp. 406-431. In: Reis, R. E., S. O. Kullander & C. J. Ferraris Jr (Eds.). Check list of the freshwater fishes of South and Central America. Porto Alegre, Edipucrs, 729p.
  • Cantatore, P., M. Roberti, G. Pesole, A. Ludovico, F. Milella, M. N. Gasaleta & C. Saccone. 1994. Evolutionary analysis of cytochrome b sequences in some Perciformes: evidence for a slower rate of evolution than in mammals. Journal of Molecular Evolution, 39(6): 589-597.
  • Cione, A. L., S. M. Pereira, R. Alonso & J. Arias. 1985. Los bagres (Osteichthyes:Siluriformes) de la formacion Yacoraite (Cretacico tardio) del noroeste argentino. Consideraciones biogeograficas y bioestratigraficas.Ameghiniana, 21(2): 294-304.
  • Excoffier, L., G. Laval & S. Schneider. 2005. Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online, 1: 47-50.
  • Excoffier, L., P. E. Smouse & J. M. Quattro. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131(2): 479-491.
  • Fink, S. & W. Fink. 1981. Interrelationships of the ostariophysan fishes (Pisces, Teleostei). Zoological Journal of the Linnean Society, 72: 297-353.
  • Fu, Y. X. 1997. Statistical test of neutrality of mutations against population growth, hitchhiking and background selection. Genetics, 147(2): 915-925.
  • Garcia, G., F.Alvarez-Valin & N. Gomez. 2002. Mitochondrial genes: signals and noise in the phylogenetic reconstruction of the annual killifish genus Cynolebias (Cyprinodontiformes, Rivulidae). Biological Journal of the Linnean Society, 76(1): 49-59
  • Garcia, G., G. Wlasiuk & E. P. Lessa. 2000. High levels of mitochondrial cytochrome b divergence in annual killifishes of the genus Cynolebias (Cyprinodontiformes, Rivulidae). Zoological Journal of the Linnean Society, 129(1): 93-110.
  • Grande, L. & J. T. Eastman. 1986. A review of Antarctic ichthyofaunas in the light of new fossil discoveries. Palaeontology, 29(1): 113-137.
  • Hardman, M. 2005. The phylogenetic relationship among nondiplomystid catfishes as inferred from mitochondrial cytochrome b sequences; the search for the ictalurid sister taxon (Otophysi: Siluriformes). Molecular Phylogenetics and Evolution, 37(3): 700-720.
  • Hasegawa, M., H. Kishino & T. Yano. 1985. Dating of the human- ape splitting by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution, 22(2): 160-174.
  • Jaureguizar, A. J., R. Menni, R. Guerrero & C. Lasta. 2004. Environmental factors structuring fish communities of the Rio de la Plata estuary. Fisheries Research, 66 (2-3): 195-211.
  • Kimura, M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16(2): 111-120.
  • Kimura, M. & J. F. Crow. 1964. The number of alleles that can be maintained in a finite population. Genetics, 49(4): 725-738.
  • Kocher, T. D., W. K. Thomas, A. Meyer, S. V. Edwards, S. Paabo, F. X. Villablanca & A.C. Wilson. 1989. Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proceedings of the National Academy of Sciences, 86(16): 6196-6200.
  • Kumar, S., K. Tamura & M. Nei. 2004. MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics, 5(2): 150-163.
  • Lasta C., M. Acha, A. Brazeiro, H. Mianzan, A. Perdomo, M. Gomez & D. Calliari. 2002. Campana de Prospeccion ambiental del Rio de la Plata y su Frente Maritimo. 202pp.
  • Lundberg, J. G., A. H. Bornbusch & F. Mago-Leccia. 1991a. Gladioglanis conquistador n. sp. from Ecuador with diagnosis of the subfamilies Rhamdiinae Bleeker and Pseudopimelodinae n. subf. (Siluriformes: Pimelodidae). Copeia, 1991: 190-209.
  • Lundberg, J. G. & M. W. Littmann. 2003. Family Pimelodidae (Pimelodids). Pp. 432-446. In: Reis R. E., S. O. Kullander and C. J. Ferraris Jr. (Eds). Check list of the freshwater fishes of South and Central America. Porto Alegre, Edipucrs, 729p.
  • Lundberg, J. G., F. Mago-Leccia & P. Nass. 1991b. Exallodontus aguanai, a new genus and species of Pimelodidae (Pisces: Silu- J. Vergara, M. de las M. Azpelicueta & G. Garcia 85
  • Martin, A. P. & E. Bermingham. 1998. Systematics and evolution of lower Central American cichlids inferred from analysis of cytochrome b gene sequences. Molecular Phylogenetics and Evolution, 9(2): 192-203.
  • Medrano, J. F., E. Aasen & L. Sharrow. 1990. DNA extraction from nucleated red blood cells. Biotechniques, 8(1): 43.
  • Meyer, A., T. D. Kocher, P. Basasibwaki & A. Wilson. 1990. Monophyletic origin of Lake Victoria fishes suggested by mitochondrial DNA sequences. Nature, 347(6293): 550-553.
  • Moritz, C. 1994. Applications of mitochondrial DNA analysis in conservation: a critical review. Molecular Ecology, 3(4): 401- 411.
  • de Muizon, C., M. Gayet, A. Lavenu, G. Marshall & B. Sige. 1983. Late Cretaceous vertebrates including mammals, from Tiupampa, southcentral Bolivia. Geobios, 16(6): 747-753.
  • Nei, M., 1987. Molecular Evolutionary Genetics. Columbia University Press, New York. 512p.
  • Palumbi, S., A. Martin, S. Romano, W. O. McMillan, L. Stice & G. Grabowski. 1991. The simple fool's guide to PCR. Department of Zoology and Kewalo Marine Laboratory, Univ. Hawaii, Honolulu.
  • Peng, Z., H. Shunping & Y. Zhang. 2004. Phylogenetic relationships of glyptosteroids fishes (Siluriformes: Sisoridae) inferred from mitochondrial cytochrome b gene sequences. Molecular Phylogenetics and Evolution, 31(3): 979-987.
  • Perdices, A., E. Bermingham, A. Mantilla & I. Doadrio. 2002. Evolutionary history of the genus Rhamdia (Teleostei, Pimelodidae) in Central America. Molecular Phylogenetics and Evolution, 25(1): 172-189.
  • de Pinna, M. C. C. 1998. Phylogenetic relationships of Neotropical Siluriformes (Teleostei: Ostariophysi): historical overview and synthesis of hypotheses. Pp. 279-330. In: L. R. Malabarba, R. E. Reis, R. P. Vari, Z. M. S. Lucena, and C. A. S. Lucena (Eds.). Phylogeny and Classification of Neotropical Fishes. Porto Alegre, Edipucrs, 603p.
  • Posada, D. & K. A. Crandall. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics, 14(9): 817-818.
  • Rannala, B. & Z. Yang. 1996. Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. Journal of Molecular Evolution, 43(3): 304-311.
  • Renesto, E., C. H. Zawadzki & E. Revaldaves. 2000. Genetic evidence for two species of the genus Pimelodus Lacepede, 1803 (Siluriformes, Pimelodidae) in the Iguacu River (Brazil). Genetics and Molecular Biology, 23(4): 809-813.
  • Rodiles-Hernandez, R, D. A. Hendrickson, J. G. Lundberg & J. M. Humphries. 2005. Lacantunia enigmatica (Teleostei: Siluriformes) a new and phylogenetically puzzling freshwater fish from Mesoamerica. Zootaxa, 1000: 1-24
  • Ronquist, F. & J. P. Huelsenbeck. 2003. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19(12):1572-1574.
  • Rozas, J., J. C. Sanchez-DelBarrio, X. Messenguer & R. Rozas. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics, 19(18): 2496-2497.
  • Saitoh, K., M. Miya, J. G. Inoue, N. B. Ishiguro & M. Nishida. 2003. Mitochondrial Genomics of Ostariophysan Fishes: Perspectives on Phylogeny and Biogeography. Journal of Molecular Evolution, 56(4): 464-472.
  • Saitou, N. & M. Nei. 1987. The neighbour-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4(4): 406-425.
  • Shibatta, O. A. 2003. Family Pseudopimelodidae (Bumblebee catfishes, dwarf marbled catfishes). Pp. 401-405. In: Reis R. E., S. O. Kullander & C. J. Ferraris (Eds). Jr. Check list of the freshwater fishes of South and Central America. Porto Alegre, Edipucrs, 729p.
  • Shimabukuro-Dias, C. K., C. Oliveira, R. E. Reis & F. Foresti. 2004. Molecular phylogeny of the armored catfish family Callichthyidae (Ostariophysi, Siluriformes). Molecular Phylogenetics and Evolution, 32(1): 152-163.
  • Slatkin, M. 1991. Inbreeding corfficients and coalescence times. Genetical Research, 58: 167-175.
  • So, N., J. K. J. Van Houdt & F. A. M. Volckaert. 2006. Genetic diversity and population history of the migratory catfishes Pangasianodon hypophthalmus and Pangasius bocourti in the Cambodian Mekong River. Fisheries Science, 72(3): 469-476.
  • Sullivan, P., J. G. Lundberg & M. Hardman. 2006. A phylogenetic analysis of the major groups of catfishes (Teleostei: Siluriformes) using rag1 and rag2 nuclear gene sequences. Molecular Phylogenetics and Evolution, 41(3): 636-662.
  • Sverlij, S., L. Lopez, R. Delfino & A. Espinach Ros. 1998. Peces del Rio Uruguay. C.A.R.U. 89p.
  • Swofford, D. L. 1998. PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4.0b8. Sinauer Associates, Sunderland, Massachusetts.
  • Tajima, F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics, 123(3): 585- 595.
  • Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin & D. G. Hoggins. 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acid Research, 25(24): 4876.
  • Wright, S. 1951. The genetical structure of populations. Annals of Eugenics, 15: 323-354.