Published August 29, 2021
| Version v1.0
Software
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andres-snchz/create_PopArtFile: create PopArtFile
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Description
This Shiny app facilitates the creation of PopART input files (Population Analysis with Reticulate Trees; Leigh & Bryant 2015) for the reconstruction of haplotype networks. To use it, a fasta file with the sequences and a table with the population or trait information are needed. The table must contain at least four columns named: code (unique name of the sequences), traits (population names or traits), lon (longitude in decimal degrees), lat (latitude in decimal degrees). The sequence names must match those in the code column of the table. Please cite the related references.
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andres-snchz/create_PopArtFile-v1.0.zip
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(7.1 kB)
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Additional details
Related works
- Is supplement to
- https://github.com/andres-snchz/create_PopArtFile/tree/v1.0 (URL)