Published August 19, 2021
| Version v1
Dataset
Open
Segmenting cells in a spheroid in 3D using 2D StarDist within TrackMate
- 1. Institut Pasteur
- 2. University of Turku
Description
3D image of cells in a spheroid, imaged on a confocal microscope, used in a tutorial to demonstrate how to hack TrackMate to segment cells in 3D using the 2D segmentation algorithms it ships.
Image by Guillaume Jacquemet.
For more details see https://imagej.net/plugins/trackmate/trackmate-stardist#generation-of-3d-labels-by-tracking-2d-labels-using-trackmate