common-workflow-language/cwltool: cwltool 3.1.20210816212154 — fix for validation of SchemaDefRequirement ; writable workdirs; and named-pipes
Creators
- Peter Amstutz1
- Michael R. Crusoe2
- Farah Zaib Khan3
- Stian Soiland-Reyes4
- Manvendra Singh
- Kapil kumar5
- John Chilton6
- Thomas Hickman7
- boysha
- Rupert Nash8
- Tomoya Tanjo
- Ash Holland
- Michael Kotliar9
- Brad Chapman10
- Andrey Kartashov
- Guillermo Carrasco11
- Dan Leehr12
- Nebojsa Tijanic
- Joshua C. Randall13
- Miguel Boland
- bogdang989
- Chuck McCallum
- Hervé Ménager14
- Pau Ruiz Safont15
- Denis Yuen16
- Gijs Molenaar17
- James J Porter18
- Alejandro Barrera19
- Giacomo Tagliabue20
- 1. @CuriiHQ @arvados
- 2. @common-workflow-language
- 3. The University of Melbourne
- 4. eScience lab, University of Manchester
- 5. @common-workflow-language @NITDTERRATECHNICA
- 6. Penn State University
- 7. @Genomicsplc
- 8. University of Edinburgh
- 9. Cincinnati Children's Hospital Medical Center
- 10. Ginkgo Bioworks
- 11. @iZettle
- 12. IBM
- 13. Genomics plc
- 14. Institut Pasteur
- 15. Citrix
- 16. @OICR_news
- 17. Pythonic.nl
- 18. Recurse Center
- 19. Duke University
- 20. 4Catalyzer
Description
Validates file with SchemaDefRequirement (#1475) 1fb45c8 @tetron Fix #1480: make writable workdir actually writable (#1481) 3cf62d8 @jdidion @mr-c Allow files to be named pipes when toil-cwl-runner or other cwltool-using runners are doing streaming (#1469) 0e89055 @mhpopescu @mr-c
work around networkx issue so we don't install numpy, scipy and pandas by default 6f9b232 58238d3 0358a41 @tetron @mr-c release-test: Check python3 (#1478) fa46c0a @tetron Update rdflib requirement from <5.1,>=4.2.2 to >=4.2.2,<6.1 (#1474) cef7385 @dependabot README: Sort and expand the badge collection (now with Conda badges!) 7094ede @mr-c
Files
common-workflow-language/cwltool-3.1.20210816212154.zip
Files
(5.9 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/common-workflow-language/cwltool/tree/3.1.20210816212154 (URL)