Published August 16, 2021
| Version v2
Preprint
Open
Benchpress paper version
Creators
Description
# First make sure you are running a Linux OS (required by Singularity) and that Singularity >= 3.5 and Snakemake >= 5.3.0 are installed.
$ mkdir benchpress_paper
$ tar -xf benchpress_paper.tar.gz -C benchpress_paper
$ cd benchpress_paper
# To reproduce Section 6.1 of the paper, using all available cores, type
$ snakemake --cores all --use-singularity --configfile config/sec6.1.json
# If snakemake is installed in a conda environment called snakemake (as recommended by snakemake) you would have to load it first by
$ conda activate snakemake
Files
Files
(83.1 MB)
| Name | Size | Download all |
|---|---|---|
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md5:2e69660292e28588209e08b6bdad5302
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75.1 MB | Download |
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md5:e20b0756b7140483ce17ba663ea0e420
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8.0 MB | Download |
Additional details
Related works
- Is derived from
- Software documentation: https://github.com/felixleopoldo/benchpress (URL)
- Is supplemented by
- Preprint: arXiv:2107.03863 (arXiv)