Published August 20, 2014
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A new species of Microthyrium from Yunnan, China
- 1. School of Science, Mae Fah Luang University Tasud, Muang, Chiang Rai 57100, Thailand
- 2. School of Science, Mae Fah Luang University Tasud, Muang, Chiang Rai 57100, Thailand & Botany and Microbiology Department, College of Science, King Saud University, Riyadh 11442, Saudi Arabia
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Wu, Hai-Xia, Li, Yan-Mei, Ariyawansa, Hiran A., Li, Wen-Jing, Yang, Hui, Hyde, Kevin D. (2014): A new species of Microthyrium from Yunnan, China. Phytotaxa 176 (1): 213-218, DOI: 10.11646/phytotaxa.176.1.21, URL: http://dx.doi.org/10.11646/phytotaxa.176.1.21
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- urn:lsid:plazi.org:pub:FF9B2A4DFFFEFFF12609FFFA8A4DFF8A
References
- Cai, L., Jeewon, R. & Hyde, K.D. (2006) Phylogenetic investigations of Sordariaceae based on multiple gene sequences and morphology. Mycological Research 110: 137-150. http://dx.doi.org/10.1016/j.mycres.2005.09.014
- Cai, L., Guo, X.Y. & Hyde, K.D. (2008) Morphological and molecular characterisation of a new anamorphic genus Cheirosporium from freshwater in China. Persoonia 20: 53-58. http://dx.doi.org/10.3767/003158508X314732
- Chomnunti, P., Schoch, C.L., Aguirre-Hudson, B., Ko Ko, T.W., Hongsanan, S., Jones, E.B.G., Kodsueb, R., Phookamsak, R., Chukeatirote, E., Bahkali, A.H. & Hyde, K.D. (2011) Capnodiaceae. Fungal Diversity 51: 103-134. http://dx.doi.org/10.1007/s13225-011-0145-6
- Edgar, R.C. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32(5): 1792-1797. http://dx.doi.org/10.1093/nar/gkh340
- Ellis, J.P. (1976) British Microthyrium species and similar fungi. Transactions of the British Mycological Society 67(3): 381-394. http://dx.doi.org/10.1016/S0007-1536(76)80162-3
- Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. In: Nucleic Acids Symposium Series, pp 95-98.
- Hillis, D.M. & Bull, J.J. (1993) An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Systematic Biology 42(2): 182-192.
- Hofmann, T.A., Kirschner, R. & Piepenbring, M. (2010) Phylogenetic relationships and new records of Asterinaceae (Dothideomycetes) from Panama. Fungal Diversity 43: 39-53. http://dx.doi.org/10.1007/s13225-011-0145-6
- Hohnel, F. von (1910) Fragmente zur Mykologie: X. Mitteilung (Nr. 468 bis 526). Sitzungsberichte der Kaiserlichen Akademie der Wissenschaften Math.-naturw. Klasse Abt. I, 119: 393-473.
- Hyde, K.D., Jones, E.G.B., Liu, J.K., Ariyawansa, H.A., Boehm, E., Boonmee, S., Braun, U, Chomnunti, P., Crous, P.W., Dai, D.Q., Diederich, P., Dissanayake, A., Doilom, M. , Doveri, F., Hongsanan, S., Jayawardena, R. , Lawrey, J.D., Li, Y.M., Liu, Y.X., Lucking, R., Monkai, J., Muggia, L., Nelsen, M.P., Pang, K.L., Phookamsak, R., Senanayake, I.C., Shearer, C.A., Suetrong, S., Tanaka,K., Thambugala, K. M., Wijayawardene, N.N., Wikee, S., Wu, H.X., Zhang, Y., Hudson, B.A., Alias, S. A., Aptroot, A., Bahkali, A.H., Bezerra, J.L., Bhat, J., Jayarama, D., Camporesi, E., Chukeatirote, E., Gueidan, C., Hawksworth, D.L., Hirayama, K., Hoog, S.D., Kang, J.C., Knudsen, K., Li, W.J., Li, X.H., Liu, Z.Y., Mapook, A., McKenzie, E.H.C., Miller, A.N., Mortimer, P. E., Phillips, A.J.L., Raja, H.A. Scheuer, C., Schumm, F., Taylor, J.E., Tian, Q., Tibpromma, S., Wanasinghe, D.N., Wang, Y., Xu, J.C., Yacharoen, S., Yan, J.Y. & Zhang, M. (2013) Families of Dothideomycetes. Fungal Diversity 63(1): 1-313.
- Liu, J.K., Phookamsak, R., Doilom, M., Wikee, S., Li, Y.M., Ariyawansha, H., Boonmee, S., Chomnunti, P., Dai, D.Q., Bhat, J.D., Romero, A.I., Zhuang, W.Y., Monkai, J., Jones, E.B.G., Chukeatirote, E., Win, Ko Ko, T.W., Zhao, Y.C., Wang, Y. & Hyde K.D. (2012) Towards a natural classification of Botryosphaeriales. Fungal Diversity 57: 149-210. http://dx.doi.org/10.1007/s13225-012-0207-4
- A NEW SPECIES OF MICROTHYRIUM Phytotaxa 176 (1) © 2014 Magnolia Press 217
- Nylander, J.A.A. (2004) MrModeltest 2.0. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.
- Rannala, B. & Yang, Z. (1996) Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. Journal of Molecular Evolution 43: 304-311.
- Ronquist, F. & Huelsenbeck J.P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19(12): 1572-1574. http://dx.doi.org/10.1093/bioinformatics/btg180
- Schoch, C.L., Crous, P.W., Groenewald, J.Z., Boehm, E.W.A., Burgess, T.I., de Gruyter, J., de Hoog, G.S., Dixon, L.J., Grube, M., Gueidan, C., Harada, Y., Hatakeyama, S., Hirayama, K., Hosoya, T., Huhndorf, S.M., Hyde, K.D., Jones, E.B., Kohlmeyer, J., Kruys, A., Li, Y.M., Lucking, R., Lumbsch, H.T., Marvanova, L., Mbatchou, J.S., McVay, A.H., Miller, A.N., Mugambi, G.K., Muggia, L., Nelsen, M.P., Nelson, P., Owensby, C.A., Phillips, A.J., Phongpaichit, S., Pointing, S.B., Pujade-Renaud, V., Raja, H.A., Plata, E.R., Robbertse, B., Ruibal, C., Sakayaroj, J., Sano, T., Selbmann, L., Shearer, C.A., Shirouzu, T., Slippers, B., Suetrong, S., Tanaka, K., Volkmann-Kohlmeyer, B., Wingfield, M.J., Wood, A.R., Woudenberg, J.H., Yonezawa, H., Zhang, Y. & Spatafora J.W. (2009) A class-wide phylogenetic assessment of Dothideomycetes. Studies in Mycology 64: 1-15. http://dx.doi.org/10.3114/sim.2009.64.01
- Silvestro, D. & Michalak, I. (2010) raxmlGUI: a graphical front-end for RAxML. http://sourceforge.net/projects/raxmlgui/. Accessed August 2013.
- Stamatakis, A. (2006) RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. http://dx.doi.org/10.1093/bioinformatics/btl446
- Swofford, D.L. (2002) PAUP: phylogenetic analysis using parsimony, version 4.0 b10. Sinauer Associates, Sunderland, MA.
- Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F. & Higgins, D.G. (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 25(24): 4876-4882. http://dx.doi.org/10.1093/nar/25.24.4876
- Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238-4246.
- White, T., Bruns, T., Lee, S. & Taylor J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J. & White, T.J. (Eds.) PCR protocols: a guide to methods and applications. Academic Press, New York, USA, pp. 315-322.
- Wu, H.X. & Hyde, K.D. (2013) Re-appraisal of Scolecopeltidium. Mycotaxon 125: 1-10. http://dx.doi.org/10.5248/125.1
- Wu, H.X., Li, Y.M., Chen, H. & Hyde K.D. (2010) Studies on Microthyriaceae: some excluded genera. Mycotaxon 113: 147-156. http://dx.doi.org/10.5248/113.147
- Wu, H.X., Schoch, C.L., Boonmee, S., Bahkali, A.H., Chomnunti, P. & Hyde K.D. (2011a) A reappraisal of Microthyriaceae. Fungal Diversity 51: 189-248. http://dx.doi.org/10.1007/s13225-011-0143-8
- Wu, H.X., Hyde, K.D. & Chen H. (2011b) Studies on Microthyriaceae: placement of Actinomyxa, Asteritea, Cirsosina, Polystomellina and Stegothyrium. Cryptogamie Mycologie 32(1): 3-12. http://dx.doi.org/10.7872/crym.v32.iss1.2012.003
- Wu, H.X., Jaklitsch, W.M., Voglmayr, H. & Hyde, K.D. (2011c) Epitypification, morphology and phylogeny of Tothia fuscella. Mycotaxon 118: 203-211. http://dx.doi.org/10.5248/118.203
- Zhaxybayeva, O. & Gogarten, J.P. (2002) Bootstrap, Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses. BMC Genomics 3: 1-15. http://dx.doi.org/10.1186/1471-2164-3-4