A transcriptome for the early-branching fern Botrychium lunaria enables fine-grained resolution of population structure

File S1: Alignment of Botrychium CRY2cA sequences used to infer the genus-level phylogeny.

File S2: Peptide sequences used to infer the orthogroups named according species names or identifiers (see Table S1).

File S3: Alignments of the orthogroup sequences subset used to infer the phylogenomy.

File S4: Output files from modeltest-ng named by orthogroup names.

File S5: Output files from raxml-ng named by orthogroup names.