Published January 6, 2020 | Version v1
Dataset Open

Inference of nonlinear receptive field subunits with spike-triggered clustering

  • 1. Stanford University
  • 2. University of California, Santa Cruz
  • 3. Howard Hughes Medical Institute

Description

Responses of sensory neurons are often modeled using a weighted combination of rectified linear subunits. Since these subunits often cannot be measured directly, a flexible method is needed to infer their properties from the responses of downstream neurons. We present a method for maximum likelihood estimation of subunits by soft-clustering spike-triggered stimuli, and demonstrate its effectiveness in visual neurons. Subunits estimated from parasol retinal ganglion cells (RGCs) in macaque retina partitioned the receptive field into compact regions, likely representing aggregated bipolar cell inputs. Joint clustering revealed shared subunits in neighboring RGCs, producing a parsimonious population model. Closed-loop validation, using stimuli lying in the null space of the linear receptive field, revealed stronger nonlinearities in OFF cells than ON cells. Responses to natural images, jittered to emulate fixational eye movements, were accurately predicted by the subunit model. Finally, the generality of the approach was demonstrated in macaque V1 neurons.

Files

Files (6.8 GB)

Name Size Download all
md5:fc8037fdd47ded98a95318876c798913
256.6 MB Download
md5:2caa1521e5649d8cfe064d38d615809a
5.0 GB Download
md5:dc37736e82e0d59fe3d01280f0cc92df
588.0 MB Download
md5:cfa8c1f02cce791d8eff95421c12d5b0
21.7 kB Download
md5:992bddae33c6e127cdc9aeca6c5ecbbc
954.6 MB Download