Biodiversity Literature Repository
Published May 27, 2014 | Version v1
Journal article Restricted

The identity and genetic characterization of Simulium reptans (Diptera: Simuliidae) from central and northern Europe

Creators

  • 1. Department of Zoology, Comenius University, SK-84215 Bratislava, Slovakia. E-mail: kudela@fns.uniba.sk
  • 2. Nature Research Centre, Akademijos 2, LT-08412 Vilnius, Lithuania. E-mail: bern.rasa@gmail.com
  • 3. Institute of Molecular BioMedicine, Comenius University, SK-81108 Bratislava, Slovakia. E-mail: petercelec@gmail.com Department of Molecular Biology, Comenius University, SK-84215 Bratislava, Slovakia

Description

Kúdela, Matúš, Brúderová, Tatiana, Jedlička, Ladislav, Bernotienė, Rasa, Celec, Peter, Szemes, Tomáš (2014): The identity and genetic characterization of Simulium reptans (Diptera: Simuliidae) from central and northern Europe. Zootaxa 3802 (3): 301-317, DOI: 10.11646/zootaxa.3802.3.1

Files

Restricted

The record is publicly accessible, but files are restricted to users with access.

Linked records

Additional details

Cites
Publication: 10.2478/v10055-009-0015-7 (DOI)
Publication: 10.1046/j.1365-294x.2000.01020.x (DOI)
Publication: 10.1093/oxfordjournals.molbev.a025550 (DOI)
Publication: 10.2478/s11756-006-0055-3 (DOI)
Publication: 10.1016/0092-8674(90)90016-8 (DOI)
Publication: 10.1111/j.1095-8312.1996.tb01434.x (DOI)
Publication: 10.1111/j.1096-3642.2009.00500.x (DOI)
Publication: 10.1093/bioinformatics/btp187 (DOI)
Publication: 10.1111/j.1558-5646.2007.00124.x (DOI)
Publication: 10.1046/j.1365-294x.2000.00887.x (DOI)
Publication: 10.1111/j.1471-8286.2006.01368.x (DOI)
Publication: 10.1111/j.1755-0998.2009.02648.x (DOI)
Publication: 10.1111/j.1365-2583.1993.tb00132.x (DOI)
Publication: 10.1093/molbev/msr121 (DOI)
Publication: 10.1046/j.1365-294x.1998.00308.x (DOI)
Publication: 10.1046/j.1365-294x.2003.02041.x (DOI)
Publication: 10.1080/01650429509361583 (DOI)
Publication: 10.1080/01650428009361033 (DOI)
Has part
Dataset: http://table.plazi.org/id/53B581DCFFE72338FF7624A8FDA944FC (URL)
Dataset: http://table.plazi.org/id/53B581DCFFE2233DFF7624A8FA4F44FC (URL)
Figure: 10.5281/zenodo.4915509 (DOI)
Figure: 10.5281/zenodo.4915511 (DOI)
Figure: 10.5281/zenodo.4915513 (DOI)
Figure: 10.5281/zenodo.4915515 (DOI)

References

  • Adler, P.H. & Crosskey, R.W. (2009) World blackflies (Diptera, Simuliidae): a fully revised edition of the taxonomic and geographical inventory [2009]. 109 pp. Available from: http://blackflies.info/sites/blackflies.info/files/u13/ SIMULIIDAE_INVENTORY__NEW_VERSION_2009.pdf (accessed 22 May 2014)
  • Adler, P.H. & Crosskey, R.W. (2012) World blackflies (Diptera, Simuliidae): a fully revised edition of the taxonomic and geographical inventory [2012]. 119 pp. Available from: http://entweb.clemson.edu/biomia/pdfs/blackflyinventory.pdf/ (accessed 7 March 2012)
  • Barton, N.H. & Hewitt, G.M. (1985) Analysis of hybrid zones. Annual Review of Ecology and Systematics, 16, 113-148.
  • Bernotiene, R. & Stunzenas, V. (2009) On the biology of Simulium galeratum in Lithuania: ecological and molecular data. Ekologija, 55, 123-126. http://dx.doi.org/10.2478/v10055-009-0015-7
  • Carlsson, G. (1962) Studies on Scandinavian Black Flies (fam. Simuliidae). Opuscula Entomologica, supl. 21, 1-280.
  • Clement, M., Posada, D. & Crandall, K.A. (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology, 9, 1657-1659. http://dx.doi.org/10.1046/j.1365-294x.2000.01020.x
  • Crandall, K.A. (1996) Multiple interspecies transmissions of human and simian T-cell leukemia/lymphoma virus type I sequences. Molecular Biology and Evolution, 13, 115-131. http://dx.doi.org/10.1093/oxfordjournals.molbev.a025550
  • Crandall, K.A. & Templeton, A.R. (1993) Empirical tests of some predictions from coalescent theory with applications to intraspecific phylogeny reconstruction. Genetics, 134, 959-969.
  • Crosskey, R.W. (1988) An annotated checklist of the world blackflies (Diptera: Simuliidae). In: Kim, K.C. & Merritt, R.W. (Eds.), Black Flies. Ecology, Population Management, and Annoted World List. Pennsylvania State University, University Park & London, pp. 425-520.
  • Crosskey, R.W. & Howard, T.M. (2004) A revised taxonomic and geographical inventory of world blackflies (Diptera: Simuliidae). The Natural History Museum, London. 78 pp. Available from: http://www.nhm.ac.uk/research-curation/ projects/blackflies/ (accessed 7 March 2011)
  • Day, J.C., Goodall, T.I. & Post, R.J. (2008) Confirmation of the species status of the blackfly Simulium galeratum in Britain using molecular taxonomy. Medical and Veterinary Entomology, 22, 55-61.
  • Dusinsky, R., Kudela, M., Stloukalova, V. & Jedlicka, L. (2006) Use of inter-simple sequence repeat (ISSR) markers for discrimination between and within species of blackflies (Diptera: Simuliidae). Biologia, Bratislava, 61, 299-304. http://dx.doi.org/10.2478/s11756-006-0055-3
  • Edwards, F.W. (1920) On the British species of Simulium. II. The early stages; with corrections and additions to part I. Bulletin of Entomological Research, 11, 211-246.
  • Enderlein, G. (1921) Neue palaarktische Simuliiden. Sitzungsberichte der Gesellschaft Naturforschenden Freunde zu Berlin, 1920, 212-224.
  • Engels, W.R., Johnson-Schlitz, D.M., Eggleston W.B. & Sved, J. (1990) High-frequency P element loss in Drosophila is homolog dependent. Cell, 62, 515-525. http://dx.doi.org/10.1016/0092-8674(90)90016-8
  • Excoffier, L., Laval, G. & Schneider, S. (2005) Arlequin ver. 3.0: An integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online, 1, 47-50.
  • Folmer, O., Black, M., Hoeh, W., Lutz, R. & Vrijenhoek, R. (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology, 3, 294-299.
  • Hewitt, G.M. (1996) Some genetic consequences of ice ages, and their role in divergence and speciation. Biological Journal of the Linnean Society, 58, 247-276. http://dx.doi.org/10.1111/j.1095-8312.1996.tb01434.x
  • Ilmonen, J., Adler, P.H., Malmqvist, B. & Cywinska, A. (2009) The Simulium vernum group (Diptera: Simuliidae) in Europe: multiple character sets for assessing species status. Zoological Journal of the Linnean Society, 156, 847-863. http://dx.doi.org/10.1111/j.1096-3642.2009.00500.x
  • Jedlicka, L. & Knoz, J. (2006) Simuliidae Newman, 1834. In: Jedlicka, L., Stloukalova, V. & Kudela, M. (Eds.), Checklist of Diptera of the Czech Republic and Slovakia. Electronic version 1. Available from http://zoology.fns.uniba.sk/diptera/ (accessed 7 March 2011)
  • Jedlicka, L. & Knoz, J. (2009) Simuliidae Newman, 1834. In: Jedlicka L., Kudela, M. & Stloukalova, V. (Eds.), Checklist of Diptera of the Czech Republic and Slovakia. Electronic version 2. Available from: http://zoology.fns.uniba.sk/diptera2009/ (accessed 7 March 2011)
  • Jedlicka, L., Kudela, M. & Stloukalova, V. (2004) Key to the identification of blackly pupae (Diptera: Simuliidae) of Central Europe. Biologia, Bratislava, 59/Suppl. 15, 157-178.
  • Jedlicka, L. & Seitz, G. (2008) Black flies of the River Danube (Diptera, Simuliidae). Lauterbornia, 62, 93-119.
  • Knoz, J. (1965) To Identification of Czechoslovakian Black-Flies (Diptera, Simuliidae). Folia Facultatis Scientiarium Naturalium Universitatis Purkynianae Brunensis, Biologia, 2 (6), 1-54.
  • Knoz, J. & Jedlicka, L. (1997) Simuliidae. In: Chvala, M. (Ed.), Check list of Diptera (Insecta) of the Czech and Slovak Republics. Karolinum - Charles University Press, Praha, pp. 42.
  • Librado, P. & Rozas, J. (2009) DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinformatics, 25, 1451-1452. http://dx.doi.org/10.1093/bioinformatics/btp187
  • Panchal, M. & Beaumont, M.A. (2007) The automation and evaluationof nested clade phylogeographic analysis. Evolution, 61, 1466-1480. http://dx.doi.org/10.1111/j.1558-5646.2007.00124.x
  • Posada, D., Crandall, K.A. & Templeton, A.R. (2000) GeoDis: a program for the cladistic nested analysis of the geographical distribution of genetic haplotypes. Molecular Ecology, 9, 487-488. http://dx.doi.org/10.1046/j.1365-294x.2000.00887.x
  • Posada, D., Crandall, K.A. & Templeton, A.R. (2006) Nested clade analysis statistics. Molecular Ecology Notes, 6, 590-593. http://dx.doi.org/10.1111/j.1471-8286.2006.01368.x
  • Raastad, J.E. (1979) Fennoscandian black-flies (Diptera, Simuliidae): annotated list of the species and their gross distribution. Rhizocrinus, 11, 1-28.
  • Raastad, J.E., Ussova, Z.V. & Kuusela, K. (2010) Blackflies of northern Europe (Diptera: Simuliidae). Version 1.0. CD-ROM. ETI Bioinformatics, Amsterdam.
  • Rivera, J. & Currie, D.C. (2009) Identification of Nearctic black flies using DNA barcodes (Diptera: Simuliidae). Molecular Ecology Resources, 9, 224-236. http://dx.doi.org/10.1111/j.1755-0998.2009.02648.x
  • Robertson, H.M. & MacLeod, E.G. (1993) Five major subfamilies of mariner transposable elements in insects, including the Mediterranean fruit fly, and related arthropods. Insect Molecular Biology, 2, 125-139. http://dx.doi.org/10.1111/j.1365-2583.1993.tb00132.x
  • Rubtsov, I.A. (as Rubzow, I.A.) (1959-1964) Simuliidae (Melusinidae). In: Lindner, E. (Ed.), Die Fliegen der palaarktischen Region 14. Schweizerbart, Stuttgart, 689 pp.
  • Tamura, K. & Nei, M. (1993) Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzes. Molecular Biology and Evolution, 10, 512-526.
  • Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011) MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Molecular Biology and Evolution, 28, 2731-2739. http://dx.doi.org/10.1093/molbev/msr121
  • Templeton, A.R. (1998) Nested clade analyses of phylogeographic data: testing hypotheses about gene flow and population history. Molecular Ecology, 7, 381-397. http://dx.doi.org/10.1046/j.1365-294x.1998.00308.x
  • Templeton, A.R. (2001) Using phylogeographic analyses of gene trees to test species status and processes. Molecular Ecology, 10, 779-791.
  • Templeton, A.R. (2004) Statistical phylogeography: methods of evaluating and minimizing inference errors. Molecular Ecology, 13, 789-809. http://dx.doi.org/10.1046/j.1365-294x.2003.02041.x
  • Templeton, A.R. (2005) Haplotype trees and modern human origins. Yearbook of Physical Anthropology, 48, 33-59.
  • Templeton, A.R., Boerwinkle, E. & Sing, C.F. (1987) A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. I. Basic theory and an analysis of alcohol dehydrogenase activity in Drosophila. Genetics, 117, 343-351.
  • Templeton, A.R., Crandall, K.A. & Sing, C.F. (1992) A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation. Genetics, 132, 619-633.
  • Templeton, A.R., Routman, E. & Phillips, C.A. (1995) Separating population structure from population history: a cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum. Genetics, 140, 767-782.
  • Templeton, A.R. & Sing, C.F. (1993) A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. IV. Nested analyses with cladogram uncertainty and recombination. Genetics, 134, 659-669.
  • Zwick, H. (1995) Contribution to the European Blackfly Taxa (Diptera: Simuliidae) Named by Enderlein. Aquatic Insects, 17, 129-173. http://dx.doi.org/10.1080/01650429509361583
  • Zwick, H. & Crosskey, R.W. (1980) The Taxonomy and Nomenclature of the Blackflies (Diptera: Simuliidae) Described by J. W. Meigen. Aquatic Insects, 2, 225-247. http://dx.doi.org/10.1080/01650428009361033