Published June 7, 2021 | Version v1
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Comparative RepeatExplorer analysis of Sorghum purpureosericeum B chromosome positive/negative plant

Description

B chromosomes are supernumerary, dispensable chromosomes, the presence of which has been detected in all major groups of living organisms - animals, plants and fungi. They do not pair with A chromosomes during meiosis and have irregular modes of inheritance. Here, we isolated and sequenced DNA from B positive and B negative nuclei of Sorghum purpureosericeum and performed repeat analysis on Illumina raw sequence data. The sequence reads were analysed using RepeatExplorer pipeline in a comparative fashion. The analysis revealed nine putative B specific clusters, which were further characterized and used in order to develop B chromosome specific markers. This dataset provides access to reads used in the analysis; assembled repetitive clusters; and result of comparative analysis between B positive and B negative samples.

Notes

Funding provided by: Czech Science Foundation
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100001824
Award Number: 18-12338Y

Funding provided by: Plants as a tool for sustainable global development
Crossref Funder Registry ID:
Award Number: LM2015047

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Additional details

Related works

Is cited by
10.1093/jxb/eraa548 (DOI)