Published May 7, 2021
| Version v3.1.0
Software
Open
ctmrbio/BACTpipe: BACTpipe v3.1.0
Creators
- 1. @seqeralabs, @biosharp-dotnet
- 2. @ctmrbio, Karolinska Institutet
- 3. @ctmrbio, University of Gothenburg
Description
Notable changes in version 3.1.0:
- Replaced Sendsketch-based contamination screening step with Kraken2 taxonomic profiling
- Now publishes shovill.log in the output directory by default.
- Added new profiles for use with Docker and CTMR Slurm HPC system Gandalf.
For more details, refer to the CHANGELOG.
Files
ctmrbio/BACTpipe-v3.1.0.zip
Files
(151.7 kB)
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md5:64dc6be75618b374ade3f03bbfd6200a
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Additional details
Related works
- Is supplement to
- https://github.com/ctmrbio/BACTpipe/tree/v3.1.0 (URL)