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Published April 26, 2021 | Version 3.1.20210426140515
Software Open

common-workflow-language/cwltool: cwltool 3.1.20210426140515 fix for SoftwareRequirement & environment modules; and more!

Creators

  • 1. @CuriiHQ @arvados
  • 2. @common-workflow-language
  • 3. The University of Melbourne
  • 4. eScience lab, University of Manchester
  • 5. @common-workflow-language @NITDTERRATECHNICA
  • 6. Penn State University
  • 7. @Genomicsplc
  • 8. University of Edinburgh
  • 9. Cincinnati Children's Hospital Medical Center
  • 10. Ginkgo Bioworks
  • 11. @iZettle
  • 12. IBM
  • 13. Genomics plc
  • 14. Institut Pasteur
  • 15. Citrix
  • 16. @OICR_news
  • 17. Pythonic.nl
  • 18. Recurse Center
  • 19. Duke University
  • 20. 4Catalyzer
  • 21. The University of Chicago

Description

Breaking change: MS Windows support has been dropped in favor of WSL 2, as previously announced 99c8f1a 337edaa @mr-c

Major re-working of software requirements and environments, including environment modules and Singularity; all thanks to @rupertnash in response to SoftwareRequirement: environment modules changes to env not propagating to tool 26530dc 3758687 29b66ed bdb20fa efda9e3 420b69f 782d5f4 9dc966e df79fd0 3f6b455 a89c329 82030b5 725174e a523c2f 4248e07 7bdc74d (@rupertnash with some help from @mr-c)

Empty hints or requriments now produce a sensible error message a3e3a57 @mr-c

Replace distutils.spawn usage 14c3f8f @KushalBeniwal

Files

common-workflow-language/cwltool-3.1.20210426140515.zip

Files (5.9 MB)

Additional details

Related works

Is supplement to
https://github.com/common-workflow-language/cwltool/tree/3.1.20210426140515 (URL)