Published February 10, 2021 | Version v1
Dataset Open

Character set and phylogenetic analyses of the living and fossil egerniine scincids of Australia

  • 1. University of Western Australia
  • 2. South Australian Museum
  • 3. Flinders University

Description

The diverse living Australian lizard fauna contrasts greatly with their limited Oligo-Miocene fossil record. New Oligo-Miocene fossil vertebrates from the Namba Formation (south of Lake Frome, South Australia) were uncovered from multiple expeditions from 2007–2018. Abundant disarticulated material of small vertebrates was concentrated in shallow lenses along the palaeo-lake edges, now exposed on the western shore. The fossiliferous lens occurring within the Namba Formation, also known from Billeroo Creek 2 km northeast of Lake Pinpa, includes abundant aquatic (such as fish, platypus Obdurodon, and waterfowl) and diverse terrestrial (such as possums, dasyuromorphs, and scincids) vertebrates and is hereafter recognised as the Fish Lens. The stratigraphic provenance of these deposits in relation to prior finds in the area is also established. A new egerniine scincid taxon Proegernia mikebulli sp. nov. described herein, is based on a near-complete reconstructed mandible, maxilla, premaxilla, and pterygoid. Postcranial scincid elements were also recovered with this material, but could not yet be confidently associated with P. mikebulli. This new taxon is recovered as the sister species to P. palankarinnensis, in a tip-dated total-evidence phylogenetic analysis, where both are recovered as stem Australian egerniines. These taxa also help pinpoint the timing of the arrival of scincids to Australia, with egerniines the first radiation to reach the continent.

Notes

See README_NambaEgerniinesRunFiles for detailed information.

Phylo files are named accordingly:

Run file: Project_numberofcharacters_numberoftaxa_numberofruns.file

Consensus trees: Project_numberofcharacters_numberoftaxa_CONSENSUS.tree

Log files: Project_numberofcharacters_numberoftaxa_clockmodels_calibrations.log

The file 'Namba_matrices_for_Mesquite.txt' can be opened in the freely available Mesquite software (Maddison and Maddison, 2017), and allows the morphological characters to be traced across the MP tree.

The Excel spreadsheet containing the continuous data (Namba_continuous_data.xlsx) includes the xml codes required to convert the morphological data set for import into xml file for analyses in BEAST.

Maddison, W. and D. Maddison (2017). Mesquite: a modular system for evolutionary analysis. Version 3.2.

Funding provided by: Sir Mark Mitchell Research Foundation
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100008301
Award Number:

Funding provided by: Australian Postgraduate Research Training Stipend*
Crossref Funder Registry ID:
Award Number:

Funding provided by: Australian Postgraduate Research Training Stipend
Crossref Funder Registry ID:

Files

Namba_4521_37_100milruns.xml

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