Published August 18, 2025 | Version 3.20.0
Software Open

nf-core/rnaseq: nf-core/rnaseq v3.20.0 - Iridium Impala

Creators

  • 1. Seqera
  • 2. @seqeralabs
  • 3. Boehringer Ingelheim
  • 4. @seanome
  • 5. @SciLifeLab
  • 6. Inivata
  • 7. @NBISweden
  • 8. Johns Hopkins University
  • 9. @qbicsoftware
  • 10. Seqera Labs
  • 11. Francis Crick Institute @crickbabs
  • 12. University of Pavia
  • 13. HKI Jena, MPI-EVA Leipzig
  • 14. >_ glicht
  • 15. CRG
  • 16. The Francis Crick Institute

Description

What's Changed

  • back to dev + nft-utils 0.0.4 by @maxulysse in https://github.com/nf-core/rnaseq/pull/1568
  • Update awsfulltest.yml to restore aligner-wise output by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1585
  • Important! Template update for nf-core/tools v3.3.2 by @nf-core-bot in https://github.com/nf-core/rnaseq/pull/1580
  • [GH-1572] Fix salmon.merged.SummarizedExperiment.rds name collision by @GallVp in https://github.com/nf-core/rnaseq/pull/1573
  • For umitools use only umi_dedup.sorted.log in multiqc_report by @idot in https://github.com/nf-core/rnaseq/pull/1571
  • Add sentieon star by @FriederikeHanssen in https://github.com/nf-core/rnaseq/pull/1590
  • Bump version to 3.20.0 ahead of release by @FriederikeHanssen in https://github.com/nf-core/rnaseq/pull/1592
  • Exclude star rsem pca from snaps by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1594
  • Exclude unstable star_rsem clusterings from snaps by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1595
  • Dev -> Master for 3.20.0 by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1593

New Contributors

  • @GallVp made their first contribution in https://github.com/nf-core/rnaseq/pull/1573
  • @idot made their first contribution in https://github.com/nf-core/rnaseq/pull/1571

Full Changelog: https://github.com/nf-core/rnaseq/compare/3.19.0...3.20.0

Files

nf-core/rnaseq-3.20.0.zip

Files (7.3 MB)

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md5:f3f83fa095bf2d932dc8178ad3fa9bfc
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Additional details

Related works

Is supplement to
Software: https://github.com/nf-core/rnaseq/tree/3.20.0 (URL)

Software

Repository URL
https://github.com/nf-core/rnaseq