Published October 24, 2024
| Version 3.17.0
Software
Open
nf-core/rnaseq: nf-core/rnaseq v3.17.0 - Neon Newt
Creators
- Harshil Patel1
- Phil Ewels2
- Jonathan Manning1
- Maxime U Garcia2
- Alexander Peltzer3
- Rickard Hammarén
- Olga Botvinnik4
- Adam Talbot2
- Gregor Sturm3
- nf-core bot
- Matthias Zepper5
- Denis Moreno6
- Pranathi Vemuri
- Mahesh Binzer-Panchal7
- Ezra Greenberg8
- silviamorins9
- Lorena Pantano
- Robert Syme10
- Gavin Kelly11
- Friederike Hanssen1
- James A. Fellows Yates12
- Jose Espinosa-Carrasco13
- rfenouil
- Luke Zappia
- Chris Cheshire14
- Edmund Miller15
- marchoeppner
- Peng Zhou
- Sarah Guinchard16
- Gisela Gabernet
- 1. Seqera
- 2. @seqeralabs
- 3. Boehringer Ingelheim
- 4. @seanome
- 5. @SciLifeLab
- 6. Inivata
- 7. @NBISweden
- 8. Johns Hopkins University
- 9. @qbicsoftware
- 10. Seqera Labs
- 11. Francis Crick Institute @crickbabs
- 12. HKI Jena, MPI-EVA Leipzig
- 13. CRG
- 14. The Francis Crick Institute
- 15. @Functional-Genomics-Lab
- 16. bilille
Description
This is a minor release done to improve ARM compatibility in the pipeline.
What's Changed
- Update dev from master by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1417
- Bump versions back to 3.17.0 after release by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1418
- Bump lots of modules so that conda versions have arm builds by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1422
- Bump STAR version for version with ARM Conda build by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1423
- patch sortmerna to 4.3.7 for ARM compatibility by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1424
- Backport support for Graviton 4 to version 3.16.1 by @pabloaledo in https://github.com/nf-core/rnaseq/pull/1414
- Add profile for ARM compatibility by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1425
- Bump versions for 3.17.0 release by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1432
- No exception for default registry by @maxulysse in https://github.com/nf-core/rnaseq/pull/1434
- update CHANGELOG by @maxulysse in https://github.com/nf-core/rnaseq/pull/1437
- Reduce matrix by @maxulysse in https://github.com/nf-core/rnaseq/pull/1440
- Fix nf-core download test by @maxulysse in https://github.com/nf-core/rnaseq/pull/1441
- Dev -> Master for 3.17.0 by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1433
New Contributors
- @pabloaledo made their first contribution in https://github.com/nf-core/rnaseq/pull/1414
Full Changelog: https://github.com/nf-core/rnaseq/compare/3.16.1...3.17.0
Files
nf-core/rnaseq-3.17.0.zip
Files
(4.9 MB)
Name | Size | Download all |
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md5:4ed59018d329bb51fe3a09b27a8d365a
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4.9 MB | Preview Download |
Additional details
Related works
- Is supplement to
- Software: https://github.com/nf-core/rnaseq/tree/3.17.0 (URL)