Published October 24, 2024 | Version 3.17.0
Software Open

nf-core/rnaseq: nf-core/rnaseq v3.17.0 - Neon Newt

  • 1. Seqera
  • 2. @seqeralabs
  • 3. Boehringer Ingelheim
  • 4. @seanome
  • 5. @SciLifeLab
  • 6. Inivata
  • 7. @NBISweden
  • 8. Johns Hopkins University
  • 9. @qbicsoftware
  • 10. Seqera Labs
  • 11. Francis Crick Institute @crickbabs
  • 12. HKI Jena, MPI-EVA Leipzig
  • 13. CRG
  • 14. The Francis Crick Institute
  • 15. @Functional-Genomics-Lab
  • 16. bilille

Description

This is a minor release done to improve ARM compatibility in the pipeline.

What's Changed

  • Update dev from master by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1417
  • Bump versions back to 3.17.0 after release by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1418
  • Bump lots of modules so that conda versions have arm builds by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1422
  • Bump STAR version for version with ARM Conda build by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1423
  • patch sortmerna to 4.3.7 for ARM compatibility by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1424
  • Backport support for Graviton 4 to version 3.16.1 by @pabloaledo in https://github.com/nf-core/rnaseq/pull/1414
  • Add profile for ARM compatibility by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1425
  • Bump versions for 3.17.0 release by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1432
  • No exception for default registry by @maxulysse in https://github.com/nf-core/rnaseq/pull/1434
  • update CHANGELOG by @maxulysse in https://github.com/nf-core/rnaseq/pull/1437
  • Reduce matrix by @maxulysse in https://github.com/nf-core/rnaseq/pull/1440
  • Fix nf-core download test by @maxulysse in https://github.com/nf-core/rnaseq/pull/1441
  • Dev -> Master for 3.17.0 by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1433

New Contributors

  • @pabloaledo made their first contribution in https://github.com/nf-core/rnaseq/pull/1414

Full Changelog: https://github.com/nf-core/rnaseq/compare/3.16.1...3.17.0

Files

nf-core/rnaseq-3.17.0.zip

Files (4.9 MB)

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md5:4ed59018d329bb51fe3a09b27a8d365a
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Additional details

Related works

Is supplement to
Software: https://github.com/nf-core/rnaseq/tree/3.17.0 (URL)