Published November 14, 2023 | Version 2.8.1
Dataset Open

tvb-data - Extended Dataset

Creators

  • 1. TVB Foundation

Description

Various demonstration datasets for use with The Virtual Brain project are provided here.

Here you will find:

  • compatible file/folder structures that can be uploaded through the web interface of TVB.  For this usage scenario, you should just download, and unzip the current package. Independently, download TVB_Distribution from  https://www.thevirtualbrain.org/ and from its web GUI upload files from this unzipped folder, at need. 
  • the default datasets used when working in console or library mode. For this usage scenario, you should download, unzip, and install in your python distribution this tvb-data as a regular python package using one of the alternatives:
    • pip install .
    • python setup.py develop

More information on TVB documentation site: http://docs.thevirtualbrain.org/ or on the main webpage of the project https://www.thevirtualbrain.org/

Notes

CHANGES: Update the Macaques dataset by correcting the weights labels order in the Connectivity

Files

tvb_data.zip

Files (337.1 MB)

Name Size Download all
md5:08ae19833ba8ac158c91fbcb988b9bf0
337.1 MB Preview Download

Additional details

Funding

HBP SGA3 – Human Brain Project Specific Grant Agreement 3 945539
European Commission

References

  • Paula Sanz Leon, Stuart A. Knock, M. Marmaduke Woodman, Lia Domide, Jochen Mersmann, Anthony R. McIntosh, Viktor Jirsa (2013) The Virtual Brain: a simulator of primate brain network dynamics. Frontiers in Neuroinformatics (7:10. doi: 10.3389/fninf.2013.00010)
  • M. Schirner, L. Domide, D. Perdikis, P. Triebkorn, L. Stefanovski, R. Pai, P. Popa, B. Valean, J. Palmer, C. Langford, A. Blickensdörfer, M. van der Vlag, S. Diaz-Pier, A. Peyser, W. Klijn, D. Pleiter, A. Nahm, O. Schmid, M. Woodman, L. Zehl, J. Fousek, S. Petkoski, L. Kusch, M. Hashemi, D. Marinazzo, J.-F. Mangin, A. Flöel, S. Akintoye, B. C. Stahl, M. Cepic, E. Johnson, G. Deco, A. R. McIntosh, C. C. Hilgetag, M. Morgan, B. Schuller, A. Upton, C. McMurtrie, T. Dickscheid, J. G. Bjaalie, K. Amunts, J. Mersmann, V. Jirsa, P. Ritter (2022) Brain simulation as a cloud service: The Virtual Brain on EBRAINS, NeuroImage 2022, doi.org/10.1016/j.neuroimage.2022.118973