Published November 5, 2020
| Version v2.4.0
Software
Open
varlociraptor/varlociraptor: Version 2.4.0
- 1. University of Duisburg-Essen
- 2. @elan-ev
Description
- Allow scenarios to contain samples for which no BAM files are available. This allows to e.g. model tumor/normal from just the tumor sample with known contamination. Resulting probabili>
- Speed up SNV and MNV computations by precomputed call and miscall likelihoods.
- Add a flag --pairhmm-mode [exact|fast], that allows to instruct varlociraptor to only compute the optimal path in the pairHMM. This should be much faster in practice, but can come with>
- Fix insert size handling on single end samples (@dlaehnemann).
Files
varlociraptor/varlociraptor-v2.4.0.zip
Files
(40.1 MB)
| Name | Size | Download all |
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md5:98680781c7c6b44254e462842094cb4a
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Additional details
Related works
- Is supplement to
- https://github.com/varlociraptor/varlociraptor/tree/v2.4.0 (URL)