Published February 14, 2024 | Version 1.1.5
Software Open

CGATOxford/UMI-tools: 1.1.5

Creators

  • 1. University of Sheffield
  • 2. EPCC, The University of Edinburgh
  • 3. Fred Hutchinson Cancer Research Center; Howard Hughes Medical Institute
  • 4. University of Colorado Anschutz Medical Campus
  • 5. Boston University
  • 6. @fulcrumgenomics
  • 7. University of Duisburg-Essen
  • 8. Platomics
  • 9. @insilicoconsulting
  • 10. The Wistar Institute
  • 11. MRC

Description

New features

  • Enables read suffixes to be removed from single end data: @IanSudbery in https://github.com/CGATOxford/UMI-tools/pull/591. See https://github.com/CGATOxford/UMI-tools/issues/580 for motivating issue
  • Adds a script to prepare umi_tools dedup output for use with RSEM: @IanSudbery in https://github.com/CGATOxford/UMI-tools/pull/609. See https://github.com/CGATOxford/UMI-tools/issues/465 and https://github.com/CGATOxford/UMI-tools/issues/607 for motivating issues

Bugfix

  • Fix lack of help messages in 1.1.4 by @IanSudbery in https://github.com/CGATOxford/UMI-tools/pull/586
  • Fixes read suffix line end: @IanSudbery in https://github.com/CGATOxford/UMI-tools/pull/611

Documentation

  • Fixed docs for dedup stats filenames: @msto in https://github.com/CGATOxford/UMI-tools/pull/604

New Contributors

  • @msto made their first contribution in https://github.com/CGATOxford/UMI-tools/pull/604

Full Changelog: https://github.com/CGATOxford/UMI-tools/compare/1.1.4...1.1.5

Files

CGATOxford/UMI-tools-1.1.5.zip

Files (16.2 MB)

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Additional details

Related works

Is supplement to
Software: https://github.com/CGATOxford/UMI-tools/tree/1.1.5 (URL)