Published May 22, 2024 | Version v0.9.0
Software Open

ome/ome-zarr-py: v0.9.0

  • 1. @openmicroscopy
  • 2. Glencoe Software Inc.
  • 3. University Goettingen
  • 4. UCL
  • 5. @theislab
  • 6. @France-Bio-Imaging-Data
  • 7. MIT
  • 8. Universiteit Gent
  • 9. Biomedicine Discovery Institute, Monash University
  • 10. Dartmouth College, @Debian, @DataLad, @PyMVPA, @fail2ban
  • 11. @AllenNeuralDynamics
  • 12. CEA
  • 13. European Molecular Biology Laboratory (EMBL)
  • 14. Yikes LLC
  • 15. Co-founder and CEO of @aspect-analytics
  • 16. @Quansight-Labs
  • 17. Harvard Medical School

Description

What's Changed

  • Only install required deps when testing by @dstansby in https://github.com/ome/ome-zarr-py/pull/328
  • Add tests on python 3.11 by @dstansby in https://github.com/ome/ome-zarr-py/pull/327
  • Simplify first example in docs by @dstansby in https://github.com/ome/ome-zarr-py/pull/326
  • add omero metadata to writer by @giovp in https://github.com/ome/ome-zarr-py/pull/261
  • Fix doc install instructions in README by @dstansby in https://github.com/ome/ome-zarr-py/pull/336
  • Improve documentation structure by @dstansby in https://github.com/ome/ome-zarr-py/pull/337
  • Gha update by @jburel in https://github.com/ome/ome-zarr-py/pull/335
  • Update and fix pre-commit by @dstansby in https://github.com/ome/ome-zarr-py/pull/333
  • Unpin fsspec in dev requirements by @dstansby in https://github.com/ome/ome-zarr-py/pull/342
  • Clarify that write_multiscale takes pre-computed arrays by @dstansby in https://github.com/ome/ome-zarr-py/pull/318
  • Simplify testing setup + Python 3.12 tests by @dstansby in https://github.com/ome/ome-zarr-py/pull/338
  • [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/ome/ome-zarr-py/pull/348
  • [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/ome/ome-zarr-py/pull/355
  • [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/ome/ome-zarr-py/pull/359
  • [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/ome/ome-zarr-py/pull/361
  • Allow to change downsample function by @nhatnm52 in https://github.com/ome/ome-zarr-py/pull/358
  • add #261 to changelog by @giovp in https://github.com/ome/ome-zarr-py/pull/370
  • Update to codecov 4 by @joshmoore in https://github.com/ome/ome-zarr-py/pull/373
  • Fix scalar chunking by @dstansby in https://github.com/ome/ome-zarr-py/pull/365
  • Support init of ome_zarr_py.io.ZarrLocation with zarr.storage.FSStore by @berombau in https://github.com/ome/ome-zarr-py/pull/349
  • Improve CLI docs by @dstansby in https://github.com/ome/ome-zarr-py/pull/367
  • [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/ome/ome-zarr-py/pull/366

New Contributors

  • @giovp made their first contribution in https://github.com/ome/ome-zarr-py/pull/261
  • @nhatnm52 made their first contribution in https://github.com/ome/ome-zarr-py/pull/358
  • @berombau made their first contribution in https://github.com/ome/ome-zarr-py/pull/349

Full Changelog: https://github.com/ome/ome-zarr-py/compare/v0.8.3...v0.9.0

Files

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Additional details

Related works

Is supplement to
Software: https://github.com/ome/ome-zarr-py/tree/v0.9.0 (URL)