nf-core/epitopeprediction: 1.1.0 - Morgenstelle
Creators
- 1. Boehringer Ingelheim
- 2. @qbicsoftware
- 3. @SciLifeLab | Karolinska Institutet
Description
Added
57 - Add option (--fasta_output) to write out FASTA file with protein sequences
44 - Add parameter (--show_supported_models) to write out supported models in files
44 - Add check if requested models for specified tools are supported by FRED2
42 - Add support for FASTA files with protein sequences as input (--input)
31 - Add support for mouse alleles
30 - Add parameter (--mem_mode) to change between different memory modes
29 - Add parallelisation for peptide input
Changed
59 - Parse and store metadata dynamically for variant data
50 - Change parameter to specify the genome version to --genome_version ( --genome deprecated)
47 - Update FRED2 to version 2.0.7
Fixed
56 - Fix result output for more than one prediction method #55
53 - Fix score and affinity output of MHCnuggets and MHCflurry #32
52 - Fix MHCflurry permission problem when run with docker profile #51
See CHANGELOG for more information.
Files
nf-core/epitopeprediction-1.1.0.zip
Files
(160.8 kB)
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Additional details
Related works
- Is supplement to
- https://github.com/nf-core/epitopeprediction/tree/1.1.0 (URL)