BleekerLab/snakemake_rnaseq: Version 0.3.1

This release creates five different outputs from mRNA-seq reads:

• .html reports of the mRNA-seq fastq quality checks.
• .bam mapping files sorted by chromosomal coordinates.
• mapping_summary.tsv, a summarised mapping report for all samples.
• raw_counts.tsv, a table comprising the raw unscaled count values for genes in the provided GTF annotation file.
• scaled_counts.tsv, a table comprising the scaled count values as given by DESeq2 for genes in the provided GTF annotation file.

Nb: the .tsv extension stands for tabulated separated values.