espenhgn/LFPy: LFPy-2.1.1
Creators
- 1. Norwegian University og Life Sciences
- 2. ETH
- 3. Working @zivid and University of Oslo
- 4. Simula Research Laboratory
Description
Feature and bugfix release. Main changes:
- Supports NEURON>7.7.2
- LFPy.Cell keyword arguments
cm
andRa
defaults to None (used to be equal toneuron.h.Section()
defaults) - Improved
LFPy.Cell.__del__()
destructor method that can be called to ensure safer execution of multiple independent cell simulations in succession (using NEURON>=7.8.x in particular) - Additional unittests
Commits since previous release https://github.com/LFPy/LFPy/releases/tag/v2.1: e2b2a3dda0d880b503eb269368cbbfeb04724972 (HEAD -> master, origin/master, origin/HEAD) Merge pull request #212 from espenhgn/rel_v2.1.1 1ebdae178425020f5b5be7ab9e454c74a99c4488 (tag: v2.1.1, origin/rel_v2.1.1, rel_v2.1.1) changed version to 2.1.1 743c71016e2b12fad302577585de666346d4017c (HEAD -> master, tag: v2.1.1rc1, origin/master, origin/HEAD) Formatting/future proofing (#210) df8d15b58e77999752d586069b684e60c5799ee7 Set Ra and cm only if not None (#211) 0452c48b4d240ef6a2801bc7bff0a193158ff1d6 fix morphology issue with NEURON>7.7.2 (#206) 394d085835e6e8ba589dd4b6e732876d10d560f2 Tests that currents sum to approximately zero (#207) 797ee1c38209ce871ad6c1653e59bd5b7cb9c659 Merge pull request #190 from espenhgn/hmin 4597315fea19d6bf2822c9cd68fc7925ebaa986b (origin/hmin) Merge branch 'master' into hmin 9db86367a5e77cc3e9edd796b9245b1c6e984df5 Merge pull request #204 from espenhgn/rel_2.1.1 7da0d5567a9ef4f77b9d7d24f028bd90de9746a3 (origin/rel_2.1.1) v2.1.1rc1 96d52432e9fce4ab0a545febed984aeaf84a723b v2.1.1.rc1 f49a768092496ef41b88e27b298cd5a48466d38d prefer mpich neuron build on travisCI a857b6847e0a6b43baa0603c1b2de9c570f0eff7 figure out which gcc is used by TravisCI 3cda48dbabba6d0ccf2d13720aa437ff8588e7b2 list packages in test environment for debugging 5a100025ff81dc91eb93faef085a3c04df66a96a add gcc_linux-64 to test environment 3436b90a2ca75992d1c8ec13fabc994860a8df03 add gxx_linux-64 to test env 0bc95c3d19fadf303e31b5035751976860f11757 Merge branch 'master' into rel_2.1.1 d90c207b91fe914c786f2142f90f2afb6525f99f remove --quiet flag c8e7134e821116b1134bf97395239084a4ff0c37 prep 2.1.1 bugfix release 82e18886961e40d52a2ff86c980acae7328e343d Merge pull request #201 from espenhgn/fix-199 0054091f7d4462d8d81f3dd1129ae0109df91c08 (origin/fix-199) renamed folder 211b175cea554c04c99facd894f9c1abc314d180 switch to conda on travisCI 2da2cee06be25613aa446160a8897a49accd63c7 Merge pull request #200 from espenhgn/fix-197 c41c1241e7d3945cbc891e477a684b96e8784835 (origin/fix-197) fix docstring example 056c30c9a421e71ade1ec992537c6a026da8cfcd Merge pull request #198 from espenhgn/dotprodresults 85b4a7b732e053fb68282d6a78758405fb29ac2b (origin/dotprodresults) added missing tests for Cell.simulate(dotprodcoeffs=[..]) parameter 56611c53ce27b6bafdc76d0d08b9490ff8601acf Merge pull request #193 from espenhgn/fix-192 8504c51906a47f9e5e552bff9a5efd779f8f132b (origin/fix-192) fixed conda install info 5705441baac90494a7266e12a45c1aca93fee79d add cvode.rtol(rtol) control option to Cell.simulate df592e2230981fdd7778232605cbe403fcc3e445 Merge pull request #189 from espenhgn/master 518628acf1af6d89038b0e068926f5e9ad42c50d add calculation of extracellular potential to example bfa2973d89019a1685469cab4fc6ef5f979a5004 Merge pull request #182 from lobertrand/minor_fix_deleted_sections 06a1831766d204cf15522b6600ded868871613dd Minor fix 1d329a35e17e08f53840bad241f7be2d2b3963c4 Merge pull request #181 from espenhgn/2.1.0 154c8a53d828147c688c10c56bff9dc34431b34a (origin/2.1.0) prep 2.1.0 release
Files
espenhgn/LFPy-v2.1.1.zip
Files
(2.6 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/espenhgn/LFPy/tree/v2.1.1 (URL)