Published August 25, 2020 | Version v1
Software Open

Used version of WhatsHap for "Haplotype Threading: Accurate Polyploid Phasing from Long Reads"

Creators

  • 1. Algorithmic Bioinformatics, Heinrich Heine University Düsseldorf, Germany
  • 2. Institute for Medical Biometry and Bioinformatics, Medical Faculty, Heinrich Heine University Düsseldorf, Germany; Center for Bioinformatics, Saarland University, Germany; Graduate School of Computer Science, Saarbrücken, Germany
  • 3. Institute for Medical Biometry and Bioinformatics, Medical Faculty, Heinrich Heine University Düsseldorf, Germany
  • 4. Algorithmic Bioinformatics, Heinrich Heine University Düsseldorf, Germany; Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University Düsseldorf, Germany

Description

Contains the version of WhatsHap, which is used for the experiments in the publication given in the title. WhatsHap is a freely available tool and can be found on GitHub: https://github.com/whatshap/whatshap

The uploaded version refers to commit b6a336f51fb4be43f4b2aca7139dca8a98fc0f69, which is release version 1.0.

Notes

Publication has been accepted for being published in Genome Biology in the near future. Therefore there is no proper reference yet.

Files

Files (4.7 MB)

Name Size Download all
md5:8a971c8195441a7ad10b105bb841a458
4.7 MB Download