Published July 23, 2020 | Version v1
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Morphological and molecular characterization of three new Parastenocarididae (Copepoda: Harpacticoida) from caves in Southern Italy

  • 1. Research and Innovation Centre, Fondazione Edmund Mach, Via E. Mach 1, 38010 San Michele all'Adige (TN), Italy.
  • 2. Department for Innovation in Biological, Agro-food and Forest Systems, Tuscia University, Largo dell'Università snc, 01100 Viterbo, Italy.
  • 3. Department of Biological, Chemical and Pharmaceutical Sciences and Technologies, University of Palermo, Via Archirafi 18, 90123, Palermo, Italy.
  • 4. Department of Biological, Geological and Environmental Sciences, Catania University, Via Androne 81, 95124 Catania, Italy.

Description

Bruno, Maria Cristina, Cottarelli, Vezio, Marrone, Federico, Grasso, Rosario, Stefani, Erika, Vecchioni, Luca, Spena, Maria Teresa (2020): Morphological and molecular characterization of three new Parastenocarididae (Copepoda: Harpacticoida) from caves in Southern Italy. European Journal of Taxonomy 689: 1-46, DOI: 10.5852/ejt.2020.689

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urn:lsid:zoobank.org:pub:4E8B68C9-4F9F-4244-9A2C-192046753782
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References

  • Akaike H. 1974. A new look at the statistical model identification. IEEE Transactions on Automatic Control 19: 716-723. https://doi.org/10.1109/TAC.1974.1100705
  • Berera R. & Cottarelli V. 2003. Two new species of interstitial harpacticoids from southern Italy and proposal of a new Parastenocaris species-group. Italian Journal of Zoology 70: 261-268. https://doi.org/10.1080/11250000309356527
  • Bruno M.C. & Cottarelli V. 1998. Description of Parastenocaris amalasuntae n. sp. and new data on Parastenocaris proserpina and Parastenocaris pasquinii from subterranean waters of central Italy (Copepoda, Harpacticoida). Italian Journal of Zoology 65: 121-136. https://doi.org/10.1080/11250009809386732
  • Bruno M.C., Cottarelli V., Hauffe H.C., Rossi C., Obertegger U., Grasso R. & Spena M.T. 2017. Morphological and phylogenetic analyses of epikarstic Parastenocarididae (Copepoda: Harpacticoida)
  • Bruno M.C, Cottarelli V., Grasso R., Latella L., Zaupa S. & Spena M.T. 2018. Epikarstic crustaceans from some Italian caves: endemisms and spatial scales. Biogeographia - The Journal of Integrative Biogeography 33: 1-18. https://doi.org/10.21426/B633035812
  • Chappuis P.A. 1936. Subterrane Harpacticoiden aus Jugoslawien. Buletinul Societatii de Stiinte din Cluj 8: 386-398.
  • Chappuis P.A. 1937. Subterrane Harpacticoiden aus Nord-Spanien. Buletinul Societatii de Stiinte din Cluj 8: 556-571.
  • Chappuis P.A. 1938. Subterrane Harpacticoiden aus Sud-Italien. Buletinul Societatii de Stiinte din Cluj 9: 153-181.
  • Chappuis P.A. & Rouch R. 1959. Harpacticoides cavernicoles des Basses-Pyrenees. Annales de Speleologie 14: 197-211.
  • Coineau N. & Boutin C. 1992. Biological processes in space and time. Colonization, evolution and speciation in interstitial stygobionts. In: Camacho A.I. (ed.) The Natural History of Biospeleology: 423- 451. Monografias 7, CSIC Ed., Museo Nacional de Ciencias Naturales, Madrid.
  • Corgosinho P.H.C., Martinez Arbizu P. & Previattelli D. 2012. Establishment of a new genus for Parastenocaris itica (Copepoda, Harpacticoida) from El Salvador, Central America, with discussion of the Parastenocaris fontinalis and P. proserpina groups. Iheringia Serie Zoologia 102 (4): 401-411. https://doi.org/10.1590/S0073-47212012005000009
  • Corgosinho P.H.C., Schizas N.V., Previattelli D., da Rocha C.E.F. & dos Santos-Silva E.N. 2017. A new genus of Parastenocarididae (Copepoda, Harpacticoida) from the Tocantins River basin (Goias, Brazil), and a phylogenetic analysis of the Parastenocaridinae. Zoosystematics and Evolution 93: 167-187. https://doi.org/10.3897/zse.93.11602
  • Cottarelli V. & Drigo E. 1972. Sulla presenza di Parastenocaris orcina Chappuis (Cop. Harpacticoida) in acque interstiziali del Lago di Bracciano. Notiziario del Circolo Speleologico Romano 17: 51-54.
  • Cottarelli V. & Bruno M.C. 1994. Parastenocaris rivi n. sp. di acque iporreiche dell'Isola di S. Pietro (Sardegna). [Crustacea, Copepoda, Harpacticoida]. Richerche zoologiche della nave oceanografica 'Minerva' (C.N.R.) sulle isola circumsarde. XXI. Annali del Museo civico di Storia naturale Giacomo Doria 90: 509-519.
  • Cottarelli V., Bruno M.C. & Berera R. 2008. Two new species of Parastenocaris (Copepoda, Harpacticoida, Parastenocarididae) from groundwater of Sardinia and Sicily. Crustaceana 81: 537-555. https://doi.org/10.1163/156854008784092274
  • Cottarelli V., Bruno M.C. & Berera R. 2010. First record of a Parastenocarididae from Thailand and description of a new genus (Copepoda: Harpacticoida). Journal of Crustacean Biology 30: 478-494. https://doi.org/10.1651/09-3201.1
  • Cottarelli V., Bruno M.C., Spena M.T. & Grasso R. 2012. Studies on subterranean copepods from Italy, with descriptions of two new epikarstic species from a cave in Sicily. Zoological Studies 51: 556-82.
  • Cunningham C.W. 1997. Can three incongruence tests predict when data should be combined? Molecular Biology and Evolution 14: 733-740. https://doi.org/10.1093/oxfordjournals.molbev.a025813
  • Farris J.S., Kallersjo M., Kluge A.G. & Bult C. 1995. Testing significance of incongruence. Cladistics 10: 315-319. https://doi.org/10.1111/j.1096-0031.1994.tb00181.x
  • Felsenstein J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39 (4): 783-791. https://doi.org/10.1111/j.1558-5646.1985.tb00420.x
  • Ferrari F.D. & Ivanenko V.N. 2008. The identity of protopodal segments and the ramus of maxilla 2 of copepods (Copepoda). Crustaceana 81: 823-835.
  • Folmer O., Black M., Hoeh W., Lutz R. & Vrijenhoek R. 1994. DNA primers for amplification of mithocondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology 3: 294-299.
  • Forti P. & Sauro U. 1996. The gypsum karst of Italy. International Journal of Speleology 25 (3/4): 239-250. https://doi.org/10.5038/1827-806X.25.3.18
  • Galdenzi S. & Maruoka T. 2019. Sulfuric acid caves in Calabria (South Italy): Cave morphology and sulfate deposits. Geomorphology 328: 211-221. https://doi.org/10.1016/j.geomorph.2018.12.014
  • Gasparo F. 1980. Il fenomeno carsico nel territorio comunale di Cassano allo Jonio (Provincia di Cosenza). Atti e Memorie della Commissione Grotte "Eugenio Boegan" 19: 79-116.
  • Glatzel T. 1991. Neue morphologische Aspekte und die Copepodid Stadien von Parastenocaris phyllura Kiefer (Copepoda, Harpacticoida). Zoologica Scripta 20: 375-393. https://doi.org/10.1111/j.1463-6409.1991.tb00302.x
  • Guindon S. & Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology 52: 696-704. https://doi.org/10.1080/10635150390235520
  • Huys R. & Boxshall G.A. 1991. Copepod Evolution. The Ray Society, London.
  • International Commission on Zoological Nomenclature. 1999. International Code of Zoological Nomenclature, Fourth Edition: Adopted by the International Union of Biological Sciences. The International Trust for Zoological Nomenclature, London.
  • Jakobi H. 1972. Trends (Enp. P4) innerhalb der Parastenocarididen (Copepoda Harpacticoidea). Crustaceana 22: 127-146.
  • Karanovic T. & Cooper S.J.B. 2011a. Third genus of parastenocaridid copepods from Australia supported by molecular evidence (Copepoda, Harpacticoida). In: Defaye D., Suarez-Morales E. & Vaupel Klein J.C. (eds) Studies on Freshwater Copepoda: a Volume in Honour of Bernard Dussart: 293-337. Brill, Leiden. https://doi.org/10.1163/9789004188280_014
  • Karanovic T. & Cooper S.J.B. 2011b. Molecular and morphological evidence for short range endemism in the Kinnecaris solitaria complex (Copepoda: Parastenocarididae), with descriptions of seven new species. Zootaxa 3026: 1-64. https://doi.org/10.11646/zootaxa.3026.1.1
  • Karanovic T., Cho J.-L. & Lee W. 2012. Redefinition of the parastenocaridid genus Proserpinicaris (Copepoda: Harpacticoida), with description of three new species from Korea. Journal of Natural History 46: 1573-1613. https://doi.org/10.1080/00222933.2012.681316
  • Karanovic T., Kim K. & Grygier M.J. 2015a. A new species of Schizopera (Copepoda: Harpacticoida) from Japan, its phylogeny based on the mtCOI gene and comments on the genus Schizoperopsis. Journal of Natural History 49: 2493-2526. https://doi.org/10.1080/00222933.2015.1028112
  • Karanovic T., Eberhard S., Cooper S.J.B. & Guzik M.T. 2015b. Morphological and molecular study of the genus Nitokra (Crustacea, Copepoda, Harpacticoida) in a small palaeochannel in Western Australia. Organisms Diversity & Evolution 5: 65-99. https://doi.org/10.1007/s13127-014-0193-3
  • Klimchouk A.B., Palmer A.N., De Waele J., Auler A. & Audra P. 2017. Hypogene Karst Regions and Caves of the World. Springer, Cham. https://doi.org/10.1007/978-3-319-53348-3
  • Kumar S., Stecher G., Li M., Knyaz C. & Tamura K. 2018. MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms. Molecular Biology and Evolution 35: 1547-1549. https://doi.org/10.1093/molbev/msy096
  • Lanfear R., Calcott B., Ho S.Y.W. & Guindon S. 2012. PartitionFinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses. Molecular Biology and Evolution 29: 1695- 1701. https://doi.org/10.1093/molbev/mss020
  • Lang K. 1948. Monographie der Harpacticiden. Hakan Ohlsson, Lund.
  • Larkin M.A., Blackshields G., Brown N.P., Chenna R., McGettigan P.A., McWilliam H., Valentin F., Wallace I.M., Wilm A., Lopez R., Thompson J.D., Gibson T.J. & Higgins D.G. 2007. Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948. https://doi.org/10.1093/bioinformatics/btm404
  • Lee J. & Chang C.Y. 2009. Two groundwater copepods of the genus Parastenocaris (Harpacticoida, Parastenocarididae) from South Korea. Animal Cells and Systems 13 (2): 169-178. https://doi.org/10.1080/19768354.2009.9647209
  • Pipan T. & Culver D.C. 2007. Copepod distribution as an indicator of epikarst system connectivity. Hydrogeology Journal 15: 817-822. https://doi.org/10.1007/s10040-006-0114-4
  • Ranga Reddy Y., Totakura V.R. & Corgosinho P.H.C. 2014. Himalayacaris alaknanda n. gen., n. sp. (Copepoda: Harpacticoida: Parastenocarididae) from the Hyporeic Zone of a Himalayan River, Northern India. Journal of Crustacean Biology 34: 801-819. https://doi.org/10.1163/1937240X-00002281
  • Richterich P. 1998. Estimation of errors in "raw" DNA sequences: a validation study. Genome Research 8: 251-259. https://doi.org/10.1101/gr.8.3.251
  • Ronquist F., Teslenko M., Van der Mark P., Ayres D.L., Darling A., Hohna S., Larget B.R., Liu L.F., Suchard M.A. & Huelsenbeck J.P. 2012. MrBayes v. 3.2: efficient bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539-542. https://doi.org/10.1093/sysbio/sys029
  • Rouch R. 1986. Copepoda: harpacticoids souterrains des eaux douce continentals. In: Botosaneanu L. (ed.) Stygofauna Mundi. A Faunistic, Distributional, and Ecological Synthesis of the World Fauna Inhabiting Subterranean Waters (Including the Marine Interstitial): 321-3555. E.J. Brill, Leiden.
  • Rouch R. 1987. Copepodes harpacticoides stygobies d'Algerie. Bijdragen tot de Dierkunde 57: 71-86. https://doi.org/10.1163/26660644-05701007
  • Rouch R. 1992. Parastenocaris mangini n. sp., nouvel harpacticoide (Copepodes) stygobie des Pyrenees. Crustaceana 63 (3): 306-312. https://doi.org/10.1163/156854092X00460
  • Ruffo S. & Stoch F. 2005. Checklist e distribuzione della fauna italiana. Memorie del Museo Civico di Storia Naturale di Verona, 2nd series, Section Life Sciences 16, Museo Civico di Storia Naturale, Verona.
  • Schminke H.K. 2010. High-level phylogenetic relationships within Parastenocarididae (Copepoda, Harpacticoida). Crustaceana 83: 343-367. https://doi.org/10.1163/001121610X12627655658168
  • Schminke H.K. 2013. Stammericaris Jakobi, 1972 redefined and a new genus of Parastenocarididae (Copepoda, Harpacticoida). Crustaceana 86: 704-717. https://doi.org/10.1163/15685403-00003196
  • Swofford D.L. 2003. PAUP*. Phylogenetic Analysis Using Parsimony (and Other Methods). Version 4. Sinauer Associates, Sunderland, Massachusetts.
  • Tang C.Q., Leasi F., Obertegger U., Kieneke A., Barraclough T.G. & Fontaneto D. 2012. The widely used small subunit 18S rDNA molecule greatly underestimates true diversity in biodiversity surveys of the meiofauna. Proceedings of the National Academy of Sciences of the United States of America 109: 16208-16212. https://doi.org/10.1073/pnas.1209160109
  • Totakura V.R., Ranga Reddy Y. & Shaik S. 2014. Three new species of Parastenocarididae (Crustacea, Copepoda, Harpacticoida) from India. Zootaxa 3821: 501-537. https://doi.org/10.11646/zootaxa.3821.5.1
  • Vecchioni L., Marrone F., Rodilla M., Belda E.J. & Arculeo M. 2019. An account on the taxonomy and molecular diversity of a marine rock-pool dweller, Tigriopus fulvus (Copepoda, Harpacticoida). Ciencias Marinas 45 (2): 59-75. https://doi.org/10.7773/cm.v45i2.2946
  • Walter T.C. & Boxshall G. 2019. World of Copepods Database. Parastenocarididae Chappuis, 1940. Available from WoRMS http://www.marinespecies.org/aphia.php [accessed 15 Mar. 2019].