Published February 9, 2022
| Version v3.7.0
Software
Open
ropensci/rgbif: rgbif v3.7.0
Creators
- 1. @ourresearch
- 2. INBO
- 3. Nielsen
- 4. @inbo
- 5. Florida Museum of Natural History
- 6. @ucberkeley
- 7. Global Biodiversity Information Facility
- 8. @gbif
- 9. College of Charleston
- 10. Berkeley Institute for Data Science
- 11. UCLA
- 12. University of Washington
- 13. University of Melbourne
- 14. Australian Antarctic Division
Description
There is a new rgbif maintainer: John Waller.
NEW FEATURESderived_dataset()
: New function to register a cleaned or modified dataset on GBIF for citation. (#467)name_backbone_checklist()
: New function that takes a list, vector, or data.frame of scientific names and asynchronously matches them to the backbone. (#475)pred_isnull()
: New predicate function that includes NULL values from a column in the download. (#489)occ_download.print()
: Now prints out much more information including a DOI and citation. (#494)
gbif_citation.gbif()
: it is no longer considered best practice to generate a citation fromocc_search()
orocc_data()
. We recommendocc_download()
orderived_dataset()
instead. (#494)
occ_download_wait()
andocc_download_meta()
: now accept a class character download key directly. The keys does do not need to be class "occ_download". (#487)name_backbone()
: now returns new columns "verbatim_name", "verabtim_genus" ect. that the user has supplied. This makes it easier for the user to track what has been matched. The verbose argument also has been un-retired. Ifverbose=TRUE
, more results will be returned in a single data.frame. (#475)gbif_citation()
: will now accept a download key directly.occ_download_get()
: Does not throw an error if the data is already present andoverwrite=FALSE
, it will just give a warning and return the already present dataset. This allows users to runocc_download_get(key) %>% occ_download_import()
multiple times without re-downloading the same file withoverwrite=TRUE
.download_predicate_dsl()
: "publishingOrg" now added as a download key. (#496)key_lkup
now includes GBIF-style uppercase keys as well. Sopred("TAXON_KEY",212)
andpred("taxonKey",212)
will both work.
Wrote new articles highlighting new features and encouraging the use of occ_download()
over occ_search()
.
New articles:
- Citing GBIF Mediated Data
- Set Up Your GBIF Username and Password
- Getting Occurrence Data From GBIF
- Downloading A Long Species List
- Working With Taxonomic Names
occ_download_import()
: fixed bug related to select argument. (#479)map_fetch()
: fixed bug related tosp::CRS
(#497)
Files
ropensci/rgbif-v3.7.0.zip
Files
(10.4 MB)
Name | Size | Download all |
---|---|---|
md5:bdbd7eceafc06fb13813ce1e621237b0
|
10.4 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/ropensci/rgbif/tree/v3.7.0 (URL)