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Published July 6, 2020 | Version v0.11.0b6
Software Open

PartSeg - segmentation and reconstruction tool for 3D microscopy images

Authors/Creators

  • 1. Centre of New Technologies, University of Warsaw, Warsaw, Poland; Institute of Informatics, University of Warsaw, Warsaw, Poland
  • 2. Nencki Institute of Experimental Biology, Polish Academy of Sciences, Warsaw, Poland
  • 3. Institute of Informatics, University of Warsaw, Warsaw, Poland

Contributors

  • 1. Centre of New Technologies, University of Warsaw, Warsaw, Poland; Faculty of Mathematics and Information Science, Warsaw University of Technology, Warsaw, Poland

Description

0.11.0
  • Make sprawl algorithm name shorter
  • Unify capitalisation of measurement names
  • Add simple measurements to mask segmentation
  • Use napari as viewer
  • Add possibility to preview additional output of algorithms (In View menu)
  • Update names of available Algorithm and Measurement to be more descriptive.
Changes:
  • 6957c99790255d6ccf96312adbbe4d0dd616aae8 speedup image replace
  • 3d9b29efea54f60065bef36522eacc1330ffa4ce silence drag n drop napari mechanism
  • 2804678266ce0b0f219ca6c9a9719e52c18ecf60 change order of command when replacing
  • 3e19bf6e17ebdb06a9fb9e8db043091066247397 fix qt problematic test on docker
  • 381d70df56f806dde4c46655618f410d55052702 add test for simple measurement widget
  • c8fd5ad07488c54026504003c08bcb7846f88c26 add test for measurement widget and first part of io integration test
  • 0527cbcdb1001a1d9ddb10309b0e7a69f7935bda add viewer wrapper to avoid icon overwrite, when launch napari viewer.

This list of changes was auto generated.

Files

4DNucleome/PartSeg-v0.11.0b6.zip

Files (3.5 MB)

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md5:48d6d6cb7f5d61ae95da3e5ea67da54a
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Additional details

Related works

Is supplement to
https://github.com/4DNucleome/PartSeg/tree/v0.11.0b6 (URL)