PartSeg - segmentation and reconstruction tool for 3D microscopy images

0.16.5 - 2026-03-24

🚀 Features

• Use QScrollArea for components selection (#1328)

🐛 Bug Fixes

• Fix QtViewer initialization as preparation for napari 0.7.0 (#1351)

📚 Documentation

• Update changelog for 0.16.5 (#1372)

🧪 Testing

• [Automatic] Constraints upgrades: imagecodecs, imageio, ipykernel, ipython, pydantic, scipy, sentry-sdk, traceback-with-variables (#1329)
• [Automatic] Constraints upgrades: oiffile, tifffile (#1337)
• [Automatic] Constraints upgrades: numpy, sentry-sdk, tifffile (#1341)
• [Automatic] Constraints upgrades: imagecodecs, numpy, packaging, pandas, qtawesome, sentry-sdk, tifffile (#1347)
• [Automatic] Constraints upgrades: ipykernel, ipython, oiffile, qtconsole, sentry-sdk, superqt, tifffile (#1353)
• [Automatic] Constraints upgrades: pandas, scipy, sentry-sdk, tifffile (#1357)
• [Automatic] Constraints upgrades: sentry-sdk (#1370)

⚙️ Miscellaneous Tasks

• [pre-commit.ci] pre-commit autoupdate (#1325)
• [pre-commit.ci] pre-commit autoupdate (#1330)
• Add tzdata to hiddenimports, as preparation for pandas 3.0 (#1335)
• [pre-commit.ci] pre-commit autoupdate (#1333)
• Drop macOS-13 on Azure Pipelines, fix parameter name for pyinstaller template (#1338)
• Add Python 3.13 to supported versions (#1327)
• [pre-commit.ci] pre-commit autoupdate (#1336)
• Update runners in make-release workflow (#1344)
• Remove NumPy hack for building executable on macOS (#1345)
• [pre-commit.ci] pre-commit autoupdate (#1342)
• [pre-commit.ci] pre-commit autoupdate (#1346)
• Accept time argument in not_start mock of timer start (#1350)
• [pre-commit.ci] pre-commit autoupdate (#1354)
• Update coderabbitai configuration to not expect docstrings in tests (#1355)
• Drop test against pyside2, fix test for napari 0.7.0, add testing against Python 3.13 (#1352)
• [pre-commit.ci] pre-commit autoupdate (#1356)
• Move czifile fix to a separate file (#1362)
• Fix overwriting default path for napari settings in tests (#1363)
• [pre-commit.ci] pre-commit autoupdate (#1359)
• Use pyvista/setup-headless-display-action to set up the display (#1367)
• [pre-commit.ci] pre-commit autoupdate (#1371)

🛡️ Security

• (deps) Bump peter-evans/create-pull-request from 7 to 8 (#1340)
• (deps) Bump actions/upload-artifact from 6 to 7 in the github-actions group across 1 directory (#1361)
• (deps) Bump actions/download-artifact from 7 to 8 in the github-actions group (#1368)

Build

• (deps) Bump the github-actions group with 2 updates (#1331)
• (deps) Bump actions/checkout from 5 to 6 in the github-actions group (#1334)
• (deps) Bump the github-actions group with 2 updates (#1339)