Published April 15, 2020
| Version 1.0
Dataset
Open
PBMC 3k test datasets for besca
Description
This is a single cell transcriptomics dataset containing roughly 3,000 PBMCs. The original data was downloaded from the Seurat 3k PBMC tutorial: https://satijalab.org/seurat/v3.0/pbmc3k_tutorial.html. We reprocessed the dataset using the Besca package (https://github.com/bedapub/besca).
Files
Files
(126.0 MB)
| Name | Size | Download all |
|---|---|---|
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md5:797aa4c5b3191e8a844cba4d98918a29
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50.4 MB | Download |
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md5:1a39f94c6a62a088941a5e4296f31f39
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52.6 MB | Download |
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md5:a81fa5b46bb5eff453fdfdb63c517e98
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23.0 MB | Download |
Additional details
References
- Butler A, Hoffman P, Smibert P, Papalexi E, Satija R. Integrating single-cell transcriptomic data across different conditions, technologies, and species. Nat Biotechnol. 2018;36(5):411‐420. doi:10.1038/nbt.4096
- https://satijalab.org/seurat/v3.0/pbmc3k_tutorial.html