Published April 28, 2020
| Version v1.5.8
Software
Open
griffithlab/pVACtools: 1.5.8
Creators
- 1. The McDonnell Genome Institute at Washington University
- 2. @broadinstitute
- 3. Washington University
- 4. The McDonnell Genome Institute at Washington University School of Medicine
- 5. McDonnell Genome Institute
- 6. Washington University in St Louis
- 7. @genome, @griffithlab
- 8. Washington University School of Medicine
- 9. Global Gene Corp
- 10. Chan Zuckerberg Initiative, LLC
- 11. KSG at DFCI
Description
This is a hotfix release. It fixes the following issues:
- The
pvacseq run,pvacfuse run, andpvacbind runcommands would previously error out when running with both MHC class I and MHC class II algorithms but one or the other would not produce an all_eptiopes.tsv file. This version fixes this bug. - MHCflurry version 1.6.0 and higher changed the output file headers. This would cause errors when trying to parse these output files. pVACtools now supports both the old and the new headers.
- AGFusion updated their output file naming convention in newer versions and is now outputting .exons.csv files instead of .exons.txt files. pVACfuse is now able to process either version.
Files
griffithlab/pVACtools-v1.5.8.zip
Files
(186.6 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:41bea747aabc4da9deda17875d023430
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186.6 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/griffithlab/pVACtools/tree/v1.5.8 (URL)