Published March 10, 2020
| Version v0.3.1
Software
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earmingol/cobra_utils: cobra_utils v0.3.1
Creators
Description
Utility to simplify obtaining information from genome-scale models as well as their manipulation. This implementation is available only for working with COBRApy.
In this version you can find functions related to:
- Opening models
- Saving models
- Querying information from models, which could be related to reactions, metabolites and genes
- Running topology analysis, i.e. reporter metabolites and pathways
More information in the folder release-notes
Files
earmingol/cobra_utils-v0.3.1.zip
Files
(1.2 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/earmingol/cobra_utils/tree/v0.3.1 (URL)