Published July 14, 2022
| Version 1.8.3
Software
Open
nipy/nipype: 1.8.3
Creators
- Esteban, Oscar1
- Markiewicz, Christopher J.2
- Burns, Christopher
- Goncalves, Mathias3
- Jarecka, Dorota3
- Ziegler, Erik4
- Berleant, Shoshana
- Ellis, David Gage5
- Pinsard, Basile
- Madison, Cindee
- Waskom, Michael1
- Notter, Michael Philipp6
- Clark, Daniel7
- Manhães-Savio, Alexandre8
- Clark, Dav9
- Jordan, Kesshi10
- Dayan, Michael11
- Halchenko, Yaroslav O.12
- Loney, Fred
- Norgaard, Martin1
- Salo, Taylor13
- Dewey, Blake E14
- Johnson, Hans15
- Bougacha, Salma16
- Keshavan, Anisha17
- Yvernault, Benjamin
- Hamalainen, Carlo
- Christian, Horea18
- Ćirić , Rastko2
- Dubois, Mathieu
- Joseph, Michael19
- Cipollini, Ben20
- Tilley II, Steven21
- Visconti di Oleggio Castello, Matteo22
- De La Vega, Alejandro23
- Wong, Jason24
- Kaczmarzyk, Jakub3
- Huntenburg, Julia M.25
- Clark, Michael G.26
- Kent, James D.27
- Benderoff, Erin28
- Erickson, Drew
- Dias, Maria de Fatima29
- Hanke, Michael30
- Giavasis, Steven31
- Moloney, Brendan
- Nichols, B. Nolan32
- Tungaraza, Rosalia
- Dell'Orco, Andrea33
- Frohlich, Caroline31
- Wassermann, Demian34
- de Hollander, Gilles35
- Koudoro, Serge36
- Eshaghi, Arman37
- Millman, Jarrod
- Mancini, Matteo37
- Close, Thomas38
- Nielson, Dylan M.39
- Varoquaux, Gael40
- Waller, Lea41
- Watanabe, Aimi
- Mordom, David
- Guillon, Jérémy42
- Robert-Fitzgerald, Timothy43
- Chetverikov, Andrey44
- Rokem, Ariel45
- Acland, Benjamin46
- Forbes, Jessica
- Markello, Ross47
- Gillman, Ashley48
- Bernardoni, Fabio49
- Kong, Xiang-Zhen50
- Geisler, Daniel49
- Salvatore, John
- Gramfort, Alexandre51
- Doll, Anna52
- Buchanan, Colin
- DuPre, Elizabeth47
- Liu, Siqi53
- Schaefer, Alexander54
- Kleesiek, Jens55
- Sikka, Sharad56
- Schwartz, Yannick
- Ghayoor, Ali5
- Lee, John A.57
- Mattfeld, Aaron
- Richie-Halford, Adam58
- Liem, Franz59
- Vaillant, Ghislain60
- Perez-Guevara, Martin Felipe61
- Heinsfeld, Anibal Sólon
- Haselgrove, Christian
- Durnez, Joke62
- Lampe, Leonie63
- Poldrack, Russell
- Glatard, Tristan64
- Baratz, Zvi65
- Tabas, Alejandro66
- Cumba, Chad
- Pérez-García, Fernando37
- Blair, Ross
- Iqbal, Shariq67
- Welch, David15
- Ben-Zvi, Gal65
- Contier, Oliver68
- Triplett, William1
- Craddock, R. Cameron31
- Correa, Carlos
- Papadopoulos Orfanos, Dimitri69
- Stadler, Jörg70
- Warner, Joshua71
- Sisk, Lucinda M.72
- Falkiewicz, Marcel
- Sharp, Paul73
- Rothmei, Simon
- Kim, Sin74
- Weinstein, Alejandro
- Kahn, Ari E.75
- Kastman, Erik76
- Bottenhorn, Katherine13
- Grignard, Martin77
- Perkins, L. Nathan78
- Zhou, Dale
- Bielievtsov, Dmytro
- Cooper, Gavin79
- Stojic, Hrvoje80
- Hui Qian, Tan
- Linkersdörfer, Janosch81
- Renfro, Mandy
- Hinds, Oliver
- Stanley, Olivia82
- Küttner, René
- Pauli, Wolfgang M.83
- Xie, Xihe84
- Glen, Daniel85
- Kimbler, Adam13
- Meyers, Benjamin86
- Tarbert, Claire
- Ginsburg, Daniel
- Haehn, Daniel
- Margulies, Daniel S.87
- Condamine, Eric88
- Ma, Feilong22
- Malone, Ian B.37
- Snoek, Lukas89
- Brett, Matthew
- Cieslak, Matthew90
- Hallquist, Michael
- Molina-Romero, Miguel91
- Bilgel, Murat92
- Lee, Nat
- Kuntke, Paul93
- Jalan, Raunak
- Inati, Souheil
- Gerhard, Stephan94
- Mathotaarachchi, Sulantha95
- Saase, Victor
- Van, Andrew46
- Steele, Christopher John96
- Ort, Eduard97
- Lerma-Usabiaga, Garikoitz2
- Schwabacher, Isaac
- Arias, Jaime
- Lai, Jeff
- Pellman, John98
- Huguet, Jordi99
- Junhao WEN75
- Leinweber, Katrin100
- Chawla, Kshitij101
- Weninger, Leon102
- Modat, Marc
- Mukhometzianov, Rinat103
- Harms, Robbert
- Andberg, Sami Kristian104
- Matsubara, K
- González Orozco, Abel A.105
- Routier, Alexandre106
- Marina, Ana
- Davison, Andrew
- Floren, Andrew107
- Park, Anne
- Frederick, Blaise108
- Cheung, Brian
- McDermottroe, Conor
- McNamee, Daniel109
- Shachnev, Dmitry
- Vogel, Dorian110
- Flandin, Guillaume
- Jones, Henry111
- Gonzalez, Ivan112
- Varada, Jan
- Schlamp, Kai
- Podranski, Kornelius
- Huang, Lijie113
- Noel, Maxime
- Pannetier, Nicolas114
- Numssen, Ole68
- Khanuja, Ranjeet
- Urchs, Sebastian
- Shim, Sunjae1
- Nickson, Thomas
- Huang, Lijie113
- Broderick, William67
- Tambini, Arielle
- Mihai, Paul Glad66
- Gorgolewski, Krzysztof J.1
- Ghosh, Satrajit115
- 1. Department of Psychology, Stanford University
- 2. Stanford University
- 3. MIT
- 4. Independent
- 5. The University of Iowa
- 6. The Laboratory for Investigative Neurophysiology (The LINE), Department of Radiology and Department of Clinical Neurosciences, Lausanne, Switzerland; Center for Biomedical Imaging (CIBM), Lausanne, Switzerland
- 7. Developer
- 8. Klinikum rechts der Isar, TUM. ACPySS
- 9. UC Berkeley
- 10. University of California, San Francisco
- 11. Mayo Clinic, Neurology, Rochester, MN, USA
- 12. Dartmouth College: Hanover, NH, United States
- 13. Florida International University
- 14. Department of Electrical and Computer Engineering, Johns Hopkins University
- 15. University of Iowa
- 16. Molecular Imaging Research Center, CEA, France
- 17. UC Berkeley - UCSF Graduate Program in Bioengineering
- 18. Institute for Biomedical Engineering, ETH and University of Zurich
- 19. The Centre for Addiction and Mental Health
- 20. UC San Diego
- 21. Holland Bloorview Kids Rehabilitation Hospital
- 22. Dartmouth College
- 23. University of Texas at Austin
- 24. Shattuck Lab, UCLA Brain Mapping Center
- 25. Research Group Neuroanatomy and Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
- 26. National Institutes of Health
- 27. Neuroscience Program, University of Iowa
- 28. Concordia University
- 29. CIBIT, UC
- 30. Otto-von-Guericke-University Magdeburg, Germany
- 31. Child Mind Institute
- 32. SRI International
- 33. Charitè Universitätsmedizin Berlin, Germany
- 34. Athena EPI, Inria Sophia-Antipolis
- 35. Vrije Universiteit, Amsterdam
- 36. Indiana University, IN, USA
- 37. University College London
- 38. University of Sydney
- 39. National Institute of Mental Health
- 40. INRIA
- 41. Charite Universitatsmedizin Berlin, Germany
- 42. ARAMIS LAB, Brain and Spine Institute (ICM), Paris, France.
- 43. Penn Statistics in Imaging and Visualization Endeavor, University of Pennsylvania
- 44. Donders Institute for Brain, Cognition and Behavior, Center for Cognitive Neuroimaging
- 45. The University of Washington eScience Institute
- 46. Washington University in St Louis
- 47. Montreal Neurological Institute and Hospital
- 48. Australian eHealth Research Centre, Commonwealth Scientific and Industrial Research Organisation; University of Queensland
- 49. Division of Psychological and Social Medicine and Developmental Neuroscience, Faculty of Medicine, Technische Universität Dresden, Dresden, Germany
- 50. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China; Max Planck Institute for Psycholinguistics, Nijmegen, the Netherlands
- 51. CNRS LTCI, Telecom ParisTech, Université Paris-Saclay
- 52. Department of Psychology, University of Bielefeld, Bielefeld, Germany.
- 53. The University of Sydney
- 54. National University Singapore
- 55. UniversityHospital Heidelberg, Germany
- 56. Nathan s Kline institute for psychiatric research
- 57. NIMH IRP
- 58. University of Washington
- 59. University of Zurich
- 60. ARAMIS Lab, Paris Brain Institute
- 61. Neurospin/Unicog/Inserm/CEA
- 62. Department of Psychology, Stanford University; Parietal, INRIA
- 63. MPI CBS Leipzig, Germany
- 64. 1 McGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montréal, 3801 University Street, WB-208, H3A 2B4, Québec, Canada. 2 University of Lyon, CNRS, INSERM, CREATIS., Villeurbanne, 7, avenue Jean Capelle, 69621, France.
- 65. Sagol School of Neuroscience, Tel Aviv University
- 66. Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.
- 67. Duke University
- 68. Max Planck Institute for Human Cognitive and Brain Sciences
- 69. CEA
- 70. Leibniz Institute for Neurobiology
- 71. Mayo Clinic
- 72. Yale University; New Haven, CT, United States
- 73. University of Illinois Urbana Champaign
- 74. Korea Advanced Institute of Science and Technology
- 75. University of Pennsylvania
- 76. Harvard University - Psychology
- 77. GIGA Institute
- 78. Boston University
- 79. University of Newcastle, Australia
- 80. Max Planck UCL Centre for Computational Psychiatry and Ageing Research, University College London
- 81. German Institute for International Educational Research
- 82. Dept of Medical Biophysics, Univeristy of Western Ontario
- 83. California Institute of Technology
- 84. Weill Cornell Medicine
- 85. NIMH, Scientific and Statistical Computing Core
- 86. University of Pittsburgh
- 87. Max Planck Research Group for Neuroanatomy & Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
- 88. CNRS, UMS3552 IRMaGe
- 89. University of Amsterdam
- 90. Department of Neuropsychiatry, University of Pennsylvania
- 91. Technical University Munich
- 92. National Institute on Aging, Baltimore, MD, USA
- 93. Insitiute and Polyclinc for Diagnostic and Interventional Neuroradiology, University Hospital Carl Gustav Carus, Dresden, Germany
- 94. Institute of Neuroinformatics, ETH/University of Zurich
- 95. Enigma Biomedical Group
- 96. MPI-CBS; McGill University
- 97. Vrije Universiteit Amsterdam
- 98. Child Mind Institute / Nathan Kline Institute
- 99. BarcelonaBeta Brain Research Center
- 100. TIB – Leibniz Information Centre for Science and Technology and University Library, Hannover, Germany
- 101. INRIA-Saclay, Team Parietal
- 102. Institute of Imaging & Computer Vision, RWTH Aachen University, Germany
- 103. University of Waterloo
- 104. University of Helsinki
- 105. Universidad de Guadalajara
- 106. ARAMIS Lab
- 107. The University of Texas at Austin
- 108. Consolidated Department of Psychiatry, Harvard Medical School
- 109. University of Cambridge
- 110. University of Applied Sciences and Arts Northwestern Switzerland
- 111. Stanford University and the University of Chicago
- 112. Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, MA, USA
- 113. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
- 114. Medical Imaging & Biomarkers, Bioclinica, Newark, CA, USA.
- 115. MIT, HMS
Description
Release Notes
Bug-fix release in the 1.8.x series.
This release includes compatibility fixes for nibabel 4.x and resolves a denial-of-service bug when the etelemetry server is down that resulted in excessive (blocking) network hits that would cause any tools using nipype interfaces to take a very long time.
What's Changed- FIX: Argument order to
numpy.save()
(https://github.com/nipy/nipype/pull/3485) - FIX: Add tolerance parameter to ComputeDVARS (https://github.com/nipy/nipype/pull/3489)
- FIX: Delay access of nibabel.trackvis until actually needed (https://github.com/nipy/nipype/pull/3488)
- FIX: Avoid excessive etelemetry pings (https://github.com/nipy/nipype/pull/3484)
- ENH: Added outputs' generation to DWIBiascorrect interface (https://github.com/nipy/nipype/pull/3476)
- @LostBenjamin made their first contribution in https://github.com/nipy/nipype/pull/3485
Full Changelog: https://github.com/nipy/nipype/compare/1.8.2...1.8.3
Files
nipy/nipype-1.8.3.zip
Files
(3.8 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/nipy/nipype/tree/1.8.3 (URL)