Published March 8, 2024
| Version 3.5.5
Software
Open
deeptools/deepTools: 3.5.5
Creators
- Devon Ryan1
- Fidel Ramirez2
- Björn Grüning3
- Ward D
- Vivek Bhardwaj4
- Friederike Dündar5
- A.s.
- thomasmanke
- LeilyR
- Steffen Heyne
- Sarah Peter
- Lucille Delisle6
- Andreas Richter
- Vince
- Meng
- Fabian Kilpert
- Marius van den Beek
- Maria Doyle
- Samantha Klasfeld7
- thei
- Jan Oppelt8
- Jose Espinosa-Carrasco9
- adam
- nehhen
- Steffen Möller10
- Simon Coetzee
- Ryan Dale11
- Pavankumar Videm12
- Martin Cech13
- 1. Genedata AG
- 2. Boehringer Ingelheim Pharma GmbH & Co. KG
- 3. University of Freiburg
- 4. Utrecht University
- 5. Catenion GmbH | Weill Cornell Medicine
- 6. EPFL
- 7. Pfizer
- 8. Platomics
- 9. CRG
- 10. University of Rostock
- 11. National Institutes of Health (NIH), National Institute of Child Health and Human Development (NICHD)
- 12. @BackofenLab
- 13. @galaxyproject
Description
What's Changed
- drop support for python 3.7
- doc fixes (argparse properly displayed, minor changes in installation instructions)
- deepblue support stops
- initiate deprecation of tight_layout in plotheatmap, in favor of constrained_layout. Minor changes in paddings, etc can occur (but for the better).
- documentation changes to improve ESS tab, table constraints have been lifted & sphinx_rtd_theme to v2.0.0
- upload artifact in gh test runner pinned to 3
- Try to get the number of processors from sched_getaffinity, to avoid using to many in job submissions for example. #1199
- Fix typo in estimateScaleFactor that fixes broken argparsing. #1286
Full Changelog: https://github.com/deeptools/deepTools/compare/3.5.4...3.5.5
Files
deeptools/deepTools-3.5.5.zip
Files
(62.7 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:0b753d2452e225c81b5e7d306b386134
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62.7 MB | Preview Download |
Additional details
Related works
- Is supplement to
- Software: https://github.com/deeptools/deepTools/tree/3.5.5 (URL)