Published September 3, 2019 | Version v1
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Cinetorhynchus gabonensis, a new species of hinge-beak shrimp (Crustacea: Decapoda: Rhynchocinetidae) from the eastern Atlantic

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Ďuriš, Zdeněk, Šobáňová, Anna, Wirtz, Peter (2019): Cinetorhynchus gabonensis, a new species of hinge-beak shrimp (Crustacea: Decapoda: Rhynchocinetidae) from the eastern Atlantic. Zootaxa 4664 (2): 191-205, DOI: 10.11646/zootaxa.4664.2.2

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https://www.checklistbank.org/dataset/25806
LSID
urn:lsid:zoobank.org:pub:D6AEF9D0-CA98-40C5-A4FD-AFBEB7433BFC
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urn:lsid:plazi.org:pub:BC4F9A10AD6AFF9A8F51432BEA6C6443
URL
http://publication.plazi.org/id/BC4F9A10AD6AFF9A8F51432BEA6C6443

References

  • Baeza, J.A., Bauer, R.T., Okuno, J. & Thiel, M. (2014) Molecular phylogeny of hinge-beak shrimps (Decapoda: Caridea: Rhynchocinetes and Cinetorhynchus) and allies: a formal test of familiar and generic monophyly using a multilocus phylogeny. Zoological Journal of the Linnean Society, 172, 426-450. https://doi.org/10.1111/zoj.12173
  • Crandall, K.A. & Fitzpatrick, J.F. Jr. (1996) Crayfish molecular systematics: using a combination of procedures to estimate phylogeny. Systematic Biology, 45 (1), 1-26. https://doi.org/10.1093/sysbio/45.1.1
  • De Grave, S., Anker, A., Dworschak, P.C., Clark, P.F. & Wirtz, P. (2017) An updated checklist of the marine Decapoda of Ascension Island, central Atlantic Ocean. Journal of the Marine Biological Association of the United Kingdom, 97 (4), 759-770. https://doi.org/10.1017/S0025315414001295
  • De Grave, S., Pentcheff, N.D., Ahyong, S.T., Chan, T.-Y., Crandall, K.A., Dworschak, P.C., Felder, D.L., Feldmann, R.M., Fransen, C.H.J.M., Goulding, L.Y.D., Lemaitre, R., Low, M.E.Y., Martin, J.W., Ng, P.K.L., Schweitzer, C.E., Tan, S.H., Tshudy, D. & Wetzer, R. (2009) A classification of living and fossil genera of decapod crustaceans. The Raffles Bulletin of Zoology, 21 (Supplement), 1-109.
  • De Grave, S., Wirtz, P., Brown, J. & Anker, A. (2019) On a collection of caridean shrimps (Decapoda, Caridea) from St. Helena, south-central Atlantic, with further records from Ascension Island. Crustaceana, 92 (7), 869-879.
  • De Grave, S. & Wood, L. (2011) Further occurrences of tegumental scales in caridean shrimp (Crustacea: Decapoda: Caridea). Crustacean Research, 40, 41-50. https://doi.org/10.18353/crustacea.40.0_41
  • de Melo, G.A.S. (2007) The family Rhynchocinetidae (Crustacea, Decapoda, Caridea) on the Brazilian coast. Revista Brasileira de Zoologia, 24 (1), 54-63. https://doi.org/10.1590/S0101-81752007000100007
  • Edgar, R.C. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research, 32, 1792-1797. https://doi.org/10.1093/nar/gkh340
  • Geller, J., Meyer, C., Parker, M. & Hawk, H. (2013) Redesign of PCR primers for mitochondrial cytochrome c oxidase subunit I for marine invertebrates and application in all-taxa biotic surveys. Molecular Ecology Resources, 13, 851-861. https://doi.org/10.1111/1755-0998.12138
  • Gordon, I. (1936) On the macruran genus Rhynchocinetes, with the description of a new species. Proceedings of the Zoological Society of London, 1936, 75-88. https://doi.org/10.1111/j.1096-3642.1936.tb02280.x
  • Holthuis, L.B. (1995) Notes on Indo-West Pacific Crustacea Decapoda III to IX. Zoologische Mededelingen, 69 (13), 139-151.
  • Horka, I., De Grave, S., Fransen, C.H.J.M., Petrusek, A. & Duris, Z. (2016) Multiple host switching events shape the evolution of symbiotic palaemonid shrimps (Crustacea: Decapoda). Scientific Reports, 6, 26486. https://doi.org/10.1038/srep26486
  • Kemp, S. (1925) Notes on Crustacea Decapoda in the Indian Museum. XVII On various Caridea. Records of the Indian Museum, 27, 249-342.
  • Lanfear, R., Calcott, B., Ho, S.Y.W. & Guindon, S. (2012) PartitionFinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses. Molecular Biology and Evolution, 29, 1695-1701. https://doi.org/10.1093/molbev/mss020
  • Letunic, I. & Bork, P. (2016) Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees. Nucleic Acids Research, 44 (W1), 242-245. [W242-245] https://doi.org/10.1093/nar/gkw290
  • Mathews, L.M., Schubart, C.D., Neigel, J.E. & Felder, D.L. (2002) Genetic, ecological, and behavioural divergence between two sibling snapping shrimp species (Crustacea: Decapoda: Alpheus). Molecular Ecology, 11, 1427-1437. https://doi.org/10.1046/j.1365-294x.2002.01539.x
  • Menut, T., Berenger, L., Wirtz, P., Prat, M., Roquefort, C., Ducrocq, M. & Louisy, P. (2018) Exploration naturaliste sous-marine des petits fonds rocheux du Cap Santa Clara au Cap Esterias, Province de l'Estuaire, Gabon: les poissons marins. Les cahiers de la foundation Biotope, 21, 1-51 + Annexes.
  • Miller, M.A., Pfeiffer, W. & Schwartz, T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. Proceedings of the Gateway Computing Environments Workshop, New Orleans, Los Angeles, 14 November 2010, 1-8. https://doi.org/10.1109/GCE.2010.5676129
  • Okuno, J. (1996) Cinetorhynchus manningi, a new shrimp (Crustacea: Decapoda: Caridea: Rhynchocinetidae) from the western Atlantic. Proceedings of the Biological Society of Washington, 109, 725-730.
  • Okuno, J. (1997) Crustacea Decapoda: Review on the genus Cinetorhynchus Holthuis, 1995 from the Indo-West Pacific (Cari- dea: Rhynchocinetidae). In: Richer de Forges, B. (Ed.), Les fonds meubles des lagons de Nouvelle-Caledonie (Sedimen- tologie, Benthos). Etudes & Theses. Vol. 3. ORSTOM, Paris, pp. 31-58.
  • Okuno, J. (2009) Cinetorhynchus brucei, a new species of shrimp (Decapoda, Caridea, Rhynchocinetidae) from the Ryukyu Islands, Japan. Crustaceana, 82, 939-949. https://doi.org/10.1163/156854009X42746 9
  • Okuno, J. & Hoover, J.P. (1998) Cinetorhynchus hawaiiensis, a new shrimp forming a cryptic species pair with C. reticulatus Okuno, 1997, and new records of three congeneric species (Crustacea: Decapoda: Rhynchocinetidae). Natural History Research, 5, 31-42.
  • Okuno, J. & Tachikawa, H. (1997) Cinetorhynchus fasciatus, a new shrimp from the western and central Pacific (Decapoda: Caridea: Rhynchocinetidae). Crustacean Research, 26, 16-25. https://doi.org/10.18353/crustacea.26.0_1 6
  • Ortmann, A. (1890) Die Decapoden-Krebse des Strassburger Museums, mit besonderer berucksichtigung der von Herrn Dr. Doderlein bei Japan und bei den Liu-Kiu-Inseln gesammelten und z. Z. im Strassburger Museum aufbewahrten Formen. I. Theil. Die Unterordnung Natantia (Boas) (Abtheilungen: Penaeidae und Eucyphidea=Caridae der Autoren). Zoologische Jahrbucher. Abtheilung fur Systematik, Geographie und Biologie der Thiere, 5, 437-542., pls. 36-37.
  • Poupin, J. (2018) Les Crustaces decapodes des Petites Antilles, avec de nouvelles observations pour Saint Martin, la Guadeloupe et la Martinique. In: Collection Patrimoines Naturels. Vol. 77. Museum national d'Histoire naturelle, Paris, pp. 1-264.
  • Ronquist, F., Teslenko, M., Van Der Mark, P., Ayres, D.L., Darling, A., Hohna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsen- beck, J.P. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology, 61, 539-542. https://doi.org/10.1093/sysbio/sys029
  • Stamatakis, A. (2014) RAxML Version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics, 30 (9), 1312-1313. https://doi.org/10.1093/bioinformatics/btu03 3
  • Talavera, G. & Castresana, J. (2007) Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Systematic Biology, 56, 564-577. https://doi.org/10.1080/10635150701472164
  • Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. (2013) MEGA6: Molecular Evolutionary Genetics Analysis ver- sion 6.0. Molecular Biology and Evolution, 30, 2725-2729. https://doi.org/10.1093/molbev/mst197
  • Vaidya, G., Lohman, D.J. & Meier, R. (2011) SequenceMatrix: concatenation software for the fast assembly of multigene data- sets with character set and codon information. Cladistics, 27, 171-180. https://doi.org/10.1111/j.1096-0031.2010.00329.x
  • Wirtz, P. (2018) New records of marine invertebrates from Sao Tome and Principe, eastern Atlantic Ocean. Arquipelago - Life and Marine Sciences, 35, 41-46.
  • Xia, X. (2018) DAMBE7: New and improved tools for data analysis in molecular biology and evolution. Molecular Biology and Evolution, 35, 1550-1552. https://doi.org/10.1093/molbev/msy073
  • Xia, X., Xie, Z., Salemi, M., Chen, L. & Wang, Y. (2003) An index of substitution saturation and its application. Molecular Phylogenetics and Evolution, 26, 1-7. https://doi.org/10.1016/S1055-7903(02)00326-3