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Published July 5, 2019 | Version v0.2.0
Software Open

Integrated Omics for MEtabolomics and Genomics Annotation: Paired data platform

  • 1. Netherlands eScience Center
  • 2. Schorn

Description

Linking mas spectra and genomic information to discover new chemistry.

  • Links MS/MS mass spectra with genome, sample preparation, extraction method and instrumentation method
  • Links biosynthetic gene cluster with MS^2 mass spectra

A web application for storing paired omics data projects.

Added

  • Intro page (#45)
  • Password protected review section to review pending projects (#45)
  • Page with list of projects (#45)
  • Page to show single project (#45)
  • Web service to store project on disk as JSON documents (#46)
  • Task queue to enrich projects (#46)
  • Enrich project by fetching organism name based on genome identifier (#46)

Changed

  • original form is now for adding a project for review (#45)
  • Added metabolights study id to genome (#54)
  • Made which fields are required more clear (#42)
  • Replaced run command from yarn to docker-compose

Files

iomega/paired-data-form-v0.2.0.zip

Files (566.6 kB)

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Additional details