Chromosome 19 LD data for simulating summary statistics

This data set contains two files both of which contain R objects.

snpdata.RDS : A data frame with snp information

evd_list_chr19_hm3.RDS : A list of eigen decomposition of the SNP correlation matrix spanning chromosome 19

These data contain only SNPs in both 1k Genomes and HapMap3. Correlation matrices were estimated using LD Shrink. These data were built for use with the causeSims R package found here: https://github.com/jean997/causeSims