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Published December 20, 2024 | Version 3.1.1
Software Open

The nf-core framework for community-curated bioinformatics pipelines.

Creators

Description

This patch release includes fixing the nf-core pipelines bump-version command and adding back to the pipeline template including the modules.config file.

Template

  • Use outputs instead of the environment to pass around values between steps in the Download Test Action (#3351)
  • Fix pre commit template (#3358)
  • Set LICENSE copyright to nf-core community (#3366)
  • fix including modules.config (#3356)

Linting

  • Linting of pipeline LICENSE file is a warning to allow for author/maintainer names (#3366)

General

  • Add missing p (#3357)
  • Use manifest.contributors names if available, otherwise default to manifest.author (#3362)
  • Properly parse the names from manifest.contributors (#3364)

Notes

If you use `nf-core tools` in your work, please cite the `nf-core` publication

Files

nf-core/tools-3.1.1.zip

Files (948.8 kB)

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md5:a79931b63f2548a95e7087966aff44aa
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Additional details

Related works

Is supplement to
Software: https://github.com/nf-core/tools/tree/3.1.1 (URL)

Software

Repository URL
https://github.com/nf-core/tools