Published April 4, 2019
| Version v0.8.4
Software
Open
mirnylab/cooler: v0.8.4
Creators
- 1. MIT, Cambridge, MA, USA
- 2. Harvard Medical School
- 3. UCSF
- 4. Harvard
Description
Cooler is a Python support library for .cool files: an efficient storage format for high resolution genomic interaction matrices.
The cooler package aims to provide the following functionality:
- Build contact matrices at any genomic resolution.
- Query contact matrices.
- Export and visualize the data.
- Perform scalable out-of-core operations on the data.
- Provide a clean and well-documented Python API to interact with the data.
Follow cooler development on GitHub.
Files
mirnylab/cooler-v0.8.4.zip
Files
(8.6 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:b59c3084a42531a1d1f38aab89482482
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8.6 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/mirnylab/cooler/tree/v0.8.4 (URL)