Published December 3, 2018
| Version 0.13.1
Software
Open
vanheeringen-lab/gimmemotifs: Version 0.13.1
Creators
- 1. Radboud University
- 2. Garvan Institute of Medical Research
Description
Added
- Improved docstrings of several modules.
- Added new API examples.
- The MEME motif tools should now be recognized after install.
- Output of MEME 5.0.2 is now parsed correctly.
- If the inputfile of
gimme motifsis not recognized, a clear error message is printed. - Duplicate factors are removed from the motif factors list.
- MEME is no longer included with GimmeMotifs. When installing via conda meme will be included. If GimmeMotifs is installed via pip, then MEME needs to be installed separately.
- Changed "user" background to "custom" background.
- Updated Posmo to run with a wider variety of settings.
Files
vanheeringen-lab/gimmemotifs-0.13.1.zip
Files
(16.6 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:a7e426506ad6eb01fe23775d006267a1
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16.6 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/vanheeringen-lab/gimmemotifs/tree/0.13.1 (URL)