Elo Lab
Published October 2, 2025 | Version 1.0.0
Software Open

Coralysis: an R package for sensitive integration, reference-mapping, and cell state identification in single-cell data

Creators

  • 1. Turku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland
  • 2. InFLAMES Research Flagship Centre, University of Turku, Turku, Finland
  • 3. Institute of Biomedicine, University of Turku, Turku, Finland

Description

Clone of the GitHub repository of the Coralysis R package corresponding to the version used in the research paper Coralysis enables sensitive identification of imbalanced cell types and states in single-cell data via multi-level integration (commit: 47f1b3415663ee895df188f264ac4d8ad8d24c11). It can be installed from the original GitHub repository (https://github.com/elolab/Coralysis) following the command: 

devtools::install_github("elolab/Coralysis", ref = "47f1b3415663ee895df188f264ac4d8ad8d24c11")
 
 

 

 

Files

Coralysis-47f1b3415663ee895df188f264ac4d8ad8d24c11.zip

Files (8.0 MB)

Additional details

Funding

European Commission
ENLIGHT-TENplus - European Network Linking Informatics and Genomics of Helper T cells in Tissues 955321

Software

Repository URL
https://github.com/elolab/Coralysis
Programming language
R
Development Status
Active